KEGG   Dinoroseobacter shibae: Dshi_0328
Entry
Dshi_0328         CDS       T00612                                 
Symbol
yidC
Name
(GenBank) preprotein translocase subunit
  KO
K03217  YidC/Oxa1 family membrane protein insertase
Organism
dsh  Dinoroseobacter shibae
Pathway
dsh02024  Quorum sensing
dsh03060  Protein export
dsh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Dshi_0328 (yidC)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Dshi_0328 (yidC)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Dshi_0328 (yidC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:dsh03029]
    Dshi_0328 (yidC)
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dsh02044]
    Dshi_0328 (yidC)
Mitochondrial biogenesis [BR:dsh03029]
 Mitochondrial quality control factors
  Mitochondrial respiratory chain complex assembly factors
   Complex-IV assembly factors
    Dshi_0328 (yidC)
Secretion system [BR:dsh02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Dshi_0328 (yidC)
SSDB
Motif
Pfam: YidC_periplas 60KD_IMP Rer1
Other DBs
NCBI-ProteinID: ABV92077
RoseoBase: Dshi_0328
UniProt: A8LMA0
Position
complement(315114..316934)
AA seq 606 aa
MDDQNKNLILATALSFLVILVWFLLFPPEEPVTDPNAPTQITQSGETADVALTPPAAVTE
AAPGAAPQTAATPTENAPRVQIDTPALEGSISLLGGRIDDLSLRNYNETLEPDSPIVRLL
SPVDAPGAYYALYGWAPAGTLSFDDVPGANTLWTVESGDTLTVDTPVVLRWENGNGLIFR
RTLAVDDDFMFTVTQSVENTTETDKRMQPYGIIARHGEPDTINFFVLHEGVVAMADGSLI
ESDYDDMLDYDFVEREGARAEVEQIEQNGWIGFTDKNWMTTLIPTPGQPFTSVAKYVGNA
DIYQTETRLPTQTVPGGQTVTVETRLFAGAKEWEAIRGYERELGIEGFIDSIDWGWFYFL
TKPIFFVLHELNLLIGNMGVAIIVLTLLIKALLLPLAWKSYVSMARMKELQPEMEKLKEK
AGDDRQKLQVAMMELYKKEKVNPAAGCLPILLQIPIFFSLYKVIFVTIELRHAPFFGPFQ
DLSAPDPTSIMNLFGLLPFASPEPGSILALIFIGILPLLLGISMWLQQKLNPAPTDPTQA
MIFAWLPWVFMFMLGTFASGLIVYWIANNVITFAQQYFIMRRHGYKPDLFGNIVASFKKK
KPSEDK
NT seq 1821 nt   +upstreamnt  +downstreamnt
atggacgaccagaacaagaacctcattctcgccacggcgctcagctttctggtgatcctt
gtctggttccttcttttcccaccggaagagccggtgaccgaccccaacgcaccgacccag
atcacgcaatcgggcgagacggccgatgtcgccctgacaccgcctgcggccgtgaccgaa
gccgccccgggtgccgccccgcaaacagccgcgaccccgaccgagaacgccccgcgggtc
cagatcgacacccctgcgctggaggggtcgatctctcttctcggggggcggatagatgac
ctgtccctgaggaactacaacgaaaccctggagccggactcgccgatcgtgcgcctgctg
tcgccggtggacgcgcccggagcctactatgcgctctatggttgggccccggccggcacc
ctgtcctttgacgatgtgccgggtgccaacaccctctggaccgtggaaagcggcgacacc
ctgacggtggacacccccgtggtgctgcgctgggagaacggcaacggcctgatcttccgc
cgcaccctcgcggtggacgacgatttcatgttcacggtgacccagagcgtcgagaacacc
accgaaaccgacaagcggatgcagccctacggcatcatcgcgcgacatggcgagcccgac
acgatcaacttcttcgtgctgcacgagggcgtggtggccatggccgatggcagcctgatc
gaatccgactatgacgacatgctcgactacgatttcgtcgaacgggaaggcgcccgggcc
gaggtcgaacagatcgagcagaacggctggatcggcttcaccgacaagaactggatgacc
accctcatcccgacgcccgggcagcctttcacctccgtggcgaaatacgtgggcaacgcc
gacatctaccagaccgagacccgcctgccgacgcaaaccgtgcccgggggacagaccgtg
acggtcgagacccggctctttgccggggccaaggagtgggaagccatccgcggctacgag
cgcgagctgggcatcgaaggcttcatcgacagcatcgactggggctggttctacttcctg
accaagccgatcttcttcgttctgcacgagttgaaccttctgattggcaacatgggcgtc
gcgatcatcgtcctgaccctgctgatcaaggcgcttttgctgccgctggcctggaagtcc
tatgtctccatggcgcgcatgaaagagttgcagcccgagatggagaagctgaaggagaag
gcgggcgatgaccgccagaagctccaggttgcgatgatggagctctacaagaaggaaaag
gtgaaccccgccgcgggctgtctgccgatcctgctccagatcccgatcttcttctcgctc
tacaaggtgatcttcgtcacgatcgagctgcgtcacgccccgttcttcggcccgtttcag
gacctgtcggcgcccgacccgacctcgatcatgaacctgttcggcctgctgcccttcgcc
tcgcccgagcccggctcgatcctggcgctgatcttcatcgggatcctgccgctgctgctg
gggatttccatgtggctccagcagaagctgaacccggcgcccacggacccgacccaggcg
atgatcttcgcctggctgccctgggtgttcatgttcatgcttggcaccttcgccagcggc
ctgatcgtctactggatcgcgaacaacgtcatcaccttcgcccagcagtacttcatcatg
cggcgccacgggtacaaacccgatcttttcggcaacatcgtggccagcttcaagaagaag
aagccctcggaggacaagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

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