KEGG   Dinoroseobacter shibae: Dshi_1031Help
Entry
Dshi_1031         CDS       T00612                                 

Gene name
trpB
Definition
tryptophan synthase subunit beta (EC:4.2.1.20)
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
dsh  Dinoroseobacter shibae
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:dsh00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Dshi_1031 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Dshi_1031 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    Dshi_1031 (trpB)
Enzymes [BR:dsh01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     Dshi_1031 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
RoseoBase: 
UniProt: 
Position
1064459..1065691
Genome map
AA seq 410 aa AA seqDB search
MPDDLINSFMTGPDENGRFGDFGGRFVSETLMPLILELERQYEFAKTDQAFWDEMHHLWT
HYVGRPSPLYFAERLTERLGGAKVYLKRDELNHTGAHKINNVLGQIILARRMGKTRIIAE
TGAGQHGVATATVCAKFGLKCVVYMGAHDVERQAPNVFRMKLLGAEVVPVTSGRGTLKDA
MNDALRDWVTNVRETFYCIGTVAGPHPYPAMVRDFQAIIGQEAREQMMEAEGRLPDTLIA
AIGGGSNAMGLFYPFLDDKEVAIIGVEAGGKGVNEKMEHCASLTGGRPGVLHGNRTYLLQ
DDDGQILEGFSISAGLDYPGIGPEHAWLHDIGRAKYVSITDAEALDAFQLCCETEGIIPA
LEPSHALAHVAKIAPDLPRDHIICMNMCGRGDKDIFTVAKALGQDMSGAV
NT seq 1233 nt NT seq  +upstreamnt  +downstreamnt
atgccagacgacctgatcaattccttcatgaccggcccggacgagaatggccggttcggc
gatttcgggggccggttcgtctccgagaccctgatgccgctcatcctggagctcgaacgc
caatacgagttcgccaagaccgaccaggccttctgggacgagatgcaccatctctggacc
cattacgtgggccggcccagcccgctctatttcgccgaacgcctgaccgagcggctgggc
ggcgcgaaggtctacctcaagcgggacgagctgaaccacaccggcgcgcacaagatcaac
aacgtgttgggccagatcatcctcgcccgccgcatgggcaagacccgcatcatcgccgag
accggcgcgggccagcacggcgttgccacggccacggtctgcgccaagttcggcctgaaa
tgcgtggtctacatgggcgcccatgatgtcgaacgccaggcgcccaacgtcttccgcatg
aagctgctgggcgccgaggtcgtgcccgtcacctccggtcgcggcacgctcaaggacgcc
atgaacgacgcgttgcgcgactgggtcaccaatgtgcgcgagaccttctactgcatcggc
acggtcgcgggcccgcacccgtacccggccatggtccgcgatttccaggcgatcatcggc
caggaggcccgcgagcagatgatggaggccgagggccggctgcccgatacgctgatcgcc
gcgatcggcgggggctccaacgccatgggcctgttctacccgttcctcgatgacaaggag
gtcgcgatcatcggggtggaggccggcggcaagggcgtcaacgagaagatggagcattgc
gcatccctgaccggtggccgcccgggcgtgctccatggcaaccgcacctacctgctgcag
gacgatgacggccagatcctcgaaggcttctcgatctccgccgggctggactatcccggc
atcggaccggagcatgcctggctgcacgatatcggacgggcgaaatatgtctcgatcacc
gatgccgaggcgctcgacgccttccagctctgctgcgagaccgagggcatcatccccgcg
ctggagccgtcgcacgcgctggcccatgtggccaagatcgcgccggacctgccccgcgac
cacatcatctgcatgaacatgtgcggacgcggcgacaaggacatcttcaccgtcgccaag
gcgctgggtcaggacatgtccggcgcggtctga

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