KEGG   Drosophila simulans: Dsimw501_GD19510
Entry
Dsimw501_GD19510  CDS       T01065                                 
Symbol
Dsim_GD19510
Name
(GenBank) uncharacterized protein, isoform C
  KO
K12881  THO complex subunit 4
Organism
dsi  Drosophila simulans
Pathway
dsi03013  Nucleocytoplasmic transport
dsi03015  mRNA surveillance pathway
dsi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dsi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Dsimw501_GD19510 (Dsim_GD19510)
  09122 Translation
   03013 Nucleocytoplasmic transport
    Dsimw501_GD19510 (Dsim_GD19510)
   03015 mRNA surveillance pathway
    Dsimw501_GD19510 (Dsim_GD19510)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsi03019]
    Dsimw501_GD19510 (Dsim_GD19510)
   03041 Spliceosome [BR:dsi03041]
    Dsimw501_GD19510 (Dsim_GD19510)
Messenger RNA biogenesis [BR:dsi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     Dsimw501_GD19510 (Dsim_GD19510)
    TREX complex
     Dsimw501_GD19510 (Dsim_GD19510)
Spliceosome [BR:dsi03041]
 Complex C
  Other components
   EJC/TREX
    Dsimw501_GD19510 (Dsim_GD19510)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    Dsimw501_GD19510 (Dsim_GD19510)
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-ProteinID: KMZ01940
FlyBase: FBgn0191006
Position
3R
AA seq 258 aa
MVDKIEMSLDDIIKSTRSQKKPQAARGGPGGARKPGGQQRFAGGARRGGANAGGSPRKPG
SVLKGPRGGVAAGAVQKAKFPRGDVNSAWKHDMYDGPKRGAAGGGSGPTRLIVGNLDYGV
SNTDIKELFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMT
IQLAVSDVAVLTRPVTATDVKRRVGGPAPTPFKRGGAYPNVTAGTKPAAGGQRRERKAPP
TAEELDAELDSYINDMKI
NT seq 777 nt   +upstreamnt  +downstreamnt
atggtggacaaaattgaaatgagcctcgacgacatcatcaagtccactcgctcgcaaaaa
aagccgcaagccgcccgcggcggaccaggtggcgcccgtaaaccgggcggccagcagcgt
tttgccggtggagcccgccgcggcggagccaatgctggcggctcgcccaggaagccagga
agcgtgctcaagggcccgcgaggaggagtggccgccggagccgttcagaaggccaagttc
ccacggggcgatgtgaacagcgcttggaagcacgatatgtacgacggaccgaagaggggt
gccgccggaggaggatccggacccactcgcctcatcgtcggtaacctggactacggcgta
tccaacacggacatcaaggagctcttcaacgactttgggccgataaagaaggcggcagtg
cactacgatcgctccggtcgctcgttgggcaccgctgacgtgattttcgaacgccgcgcc
gacgccttgaaggccattaagcaataccacggcgtgcctttggacggacgccctatgacc
attcagctggccgtctcagacgtggccgtgctgacccgtcccgtaaccgccaccgatgtc
aagcgtcgcgtgggtggtcctgcaccaactccattcaagcgtggtggtgcgtatccaaat
gttacagcagggaccaagccggcggcaggcggccagcggcgggagcgcaaggctccgccc
actgccgaggagctggacgctgaactggactcgtacatcaacgacatgaagatctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   FLYBASE (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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