KEGG   Dickeya solani IPO 2222: A4U42_09390
Entry
A4U42_09390       CDS       T04410                                 
Name
(GenBank) urea carboxylase
  KO
K01941  urea carboxylase [EC:6.3.4.6]
Organism
dso  Dickeya solani IPO 2222
Pathway
dso00220  Arginine biosynthesis
dso00791  Atrazine degradation
dso01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dso00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00220 Arginine biosynthesis
    A4U42_09390
  09111 Xenobiotics biodegradation and metabolism
   00791 Atrazine degradation
    A4U42_09390
Enzymes [BR:dso01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.4  Other carbon-nitrogen ligases
    6.3.4.6  urea carboxylase
     A4U42_09390
SSDB
Motif
Pfam: CT_A_B CPSase_L_D2 CT_C_D Biotin_carb_N Biotin_carb_C Biotin_lipoyl Dala_Dala_lig_C Biotin_lipoyl_2 HlyD_3 ATP-grasp RnfC_N ATP-grasp_5 HlyD_D23 GCV_H
Other DBs
NCBI-ProteinID: ANE75532
Position
complement(2228214..2231807)
AA seq 1197 aa
MFERVLIANRGAIAVRIIRTLKKMGVKAIVVYAEADRHSLHVRQADEAWPLGDGPVRDTY
LNQDKLLHIAAQSGAQAIHPGYGFLSENAGFVTRCEQAGLVFLGPTVAQMTAFGLKHQAR
ALAQQNDVPLLPGSSLLTSLDSACEQARRIGYPVMLKSTAGGGGIGMQRCNDEDQLADAF
TRVKRLAGNNFADDGVFLEKFIARARHIEVQVFGDGRGNVIALGERDCSAQRRNQKVIEE
TPAPNLGDSVRAELQATAIRLCQAVNYRSAGTVEYVYDESSKQFWFLEVNTRLQVEHGVT
EMVYGVDIVQWMVTLGAGCLPPLHTLAATPRGHAMQVRLYAEDPAKQFQPCAGLLSNVSF
PEALPGLTLRIDHWLDNGCEVSPFYDPMLAKVLVHGDSRDAALDGMAQALNATSLYGIET
NLDWLRHLLTLPAVRRGEIITATLGSVVWQPATLDVLSGGTLTTVQDAPGRTGYWHVGVP
PSGPFDVRSFRLGNQLLGNASDAAGLEITLRGPTLRFNRDCAFAITGAAIDARLDNTPVT
GWRIHHARAGQTLTLGDIQGAGCRSYLLLAGGLACPTYLGSRSTFTLGKFGGHAGRALRA
GDVLHLAAPALPVADAVLPAPDWNSHWQLRVVYGPHGAPDYFTPEDIEAFFAADWQVHYN
SSRTGIRLIGPKPQWARTDGGEAGMHPSNIHDNAYAFGTVDFTGDMPVILGPDGPSLGGF
VCPATVIHTDLWKLGQLKAGDRIRFTPVTLEQADDLAREAEYAISAARQTAEPTIAASCP
SPVLYRRPAQNDRPSVTCLAAGDRFLLLEYGEHRLDIALRFRVHALMQWLERHPLPGVQE
LTPGIRSLQIHFDSLQCPRSALLTHLQQADDALGNLQDAAVPSRTVWLPLSWDDDACREA
ITRYTQSVRPGAPWCPSNIEFIRRINGLDSVDQVKDIVFSARYLVMGLGDVYLGAPVATP
LDPRHRLVTTKYNPARTWTAENSVGIGGAYLCVYGMEGPGGYQFIGRTLQMWNRDRQTDA
FRQPWLLRFFDQIRFYPVTAQELLAARERFPWGDYPLRTEEGEFRLADYQRNLVEQQPAI
DAFQQQRQRAFDEELARWRADGQFTFDSSLQETAADDDAVPADCYGVESQVAGSVWQWLV
TPGDTVSAGQLVGILESMKMEIPITAPIAGIIHTLYRQPGHQVQAGQLLMVIEPAEH
NT seq 3594 nt   +upstreamnt  +downstreamnt
atgtttgagcgagtactgattgccaaccgtggcgctattgcggtgcgtatcatccgcacc
ctgaaaaaaatgggcgtgaaggccatcgtcgtttatgccgaagcggatcgtcattcgctg
cacgtgcgtcaggcggacgaagcctggccgctgggcgacggcccggtgcgcgacacctac
ctgaatcaggacaaattactgcacatcgccgcgcaaagcggcgcacaggccattcacccc
ggctacggttttctgagcgaaaacgccggctttgtcacccgctgtgagcaggcgggcctg
gtattcctcggcccgaccgtggcgcagatgaccgctttcggcctcaagcatcaggcgcgc
gcgctggcgcagcagaatgacgtgccgctgctgcccggtagcagcctgcttacctcgctg
gacagtgcctgcgagcaggcgcggcgcattggttatccggtgatgttaaagagcaccgcg
ggcggcggcggcatcggcatgcagcgctgcaatgacgaagaccagttggccgatgccttt
acccgcgtgaaacggctggcgggcaacaacttcgccgacgacggcgtgtttctggaaaaa
ttcatcgcccgcgcccgccacatcgaagtgcaggtgttcggcgacggccggggcaacgtc
attgcccttggcgagcgcgactgttccgcccagcgccgcaaccagaaagtgattgaggaa
accccggcccccaaccttggcgacagcgtgcgcgccgaactgcaggccaccgccatccgg
ctgtgtcaggcggtgaactaccgcagcgcaggcacggtcgagtatgtgtacgacgaaagc
agcaagcagttctggtttctggaggtcaacacccgcctgcaggtggaacacggcgtgacc
gagatggtgtacggcgtcgacatcgtgcagtggatggtgacgctgggcgccggttgcctg
ccgccgctccacacacttgccgccacaccgcgcggccacgccatgcaggtgcggctgtac
gccgaagatccggccaaacagttccagccctgcgccggactgctgagcaacgtcagtttt
ccggaggcgctgcccggccttaccctgcgtatcgaccactggctggacaacggctgcgag
gtgtcgccgttttatgacccgatgctggcgaaagtcctcgttcacggtgacagccgagac
gccgcgctcgacggtatggcgcaagcgctgaacgccacgtcgctgtacggcatcgaaacc
aatctcgactggctgcgccacctgctgaccctgcccgccgtcaggcgtggagaaatcatc
accgcgacgctgggcagcgtcgtctggcagcccgctacgctagatgtcctcagcggcggc
acgctcaccaccgtgcaggatgcgcccggccgaaccggctactggcatgtcggcgtgccg
ccttccggtccgttcgacgttcgctccttccggctcggcaaccagttgctgggcaacgcg
tcggacgccgccgggctggagattaccctgcgcggcccaacgctgcgcttcaaccgcgac
tgcgctttcgccattaccggcgccgccatcgacgcccggctggataatacccctgtcacc
ggctggcggattcatcacgcccgcgccgggcaaacgctgacgcttggcgatattcagggc
gccggctgccgcagctacctgttgctggccggcggtctggcctgcccgacgtatctgggc
agccgcagcaccttcacgctcggcaaattcggcggccatgccgggcgggcgctgcgcgcc
ggcgacgtcctgcatctggccgcccccgcgctgcctgtcgctgatgccgtcttacccgcc
cccgactggaactctcactggcaattgcgggtggtttacgggccgcacggcgcgccggac
tactttaccccagaggatatcgaggcgtttttcgccgccgactggcaggtgcattacaac
tccagccgcaccggcatccggctgattggcccgaaacctcagtgggcgcgaaccgacggc
ggcgaagccggcatgcacccgtccaatatccatgacaacgcctacgccttcggcacggtg
gactttaccggcgatatgccggtcatcctggggccggacggcccgtcgctgggcgggttc
gtctgcccggccacggtgatccacaccgatttatggaaactcggccagttaaaagcaggc
gaccgcattcgtttcacaccggtgactctggagcaggcggacgacctggcgcgcgaagcg
gaatacgccatctccgccgctcgtcagaccgcggaaccgactatcgccgccagttgcccg
tcgcccgtgctgtaccgccgaccggcgcaaaacgatcgaccatcggtgacctgtctggcg
gcaggcgatcgcttcctgttgttggagtacggcgagcaccggctggatatcgccctgcgt
tttcgcgtgcacgcgctgatgcagtggctggaacggcatccgttgccgggcgtgcaggag
ctgacgccgggtatccgctcgctgcaaatccatttcgatagcctgcaatgcccgcgcagc
gcgctgctgacgcatctgcagcaagcggacgacgcgctcggcaacctgcaggatgccgcc
gttccctcccgcaccgtgtggctgccgctcagctgggacgacgacgcctgccgcgaggct
atcacccgttatacccagtcggtcaggcccggcgctccctggtgccccagcaacatcgaa
ttcatccgtcgcatcaacggactggattcggtggaccaggttaaagacatcgtgttcagc
gcccgctatctggtgatgggactgggagacgtctacctcggcgcgccggtcgccaccccg
ctcgacccgcgccaccggctggtcaccaccaagtacaacccggcccgcacctggacggcg
gaaaactcggtcggtatcggcggcgcctatctgtgtgtatacggcatggaaggccccggc
ggctatcagttcatcggccgcacgttacagatgtggaaccgcgatcgacaaaccgacgcc
ttccgtcagccctggttgctgcggttcttcgatcagattcgcttttatccggttaccgcg
caggagctgctggctgcccgcgagcgctttccgtggggagattacccattgcgtaccgaa
gaaggggagttccgcctcgccgactatcagcggaatctggtggaacagcaaccggcgatc
gacgctttccagcagcaacgccagcgggcatttgacgaggaactggcgcgctggcgcgcc
gacggccagttcaccttcgacagcagcttgcaggaaaccgccgccgatgacgatgccgtt
ccggccgattgttacggcgtggaaagccaggtggcgggcagcgtctggcaatggctggtt
acccccggagacaccgtcagcgccggtcaactggtggggattctggagtcgatgaaaatg
gaaattcccatcaccgcgccgatcgccggcattatccacacgctgtatcgtcaacccggt
catcaggtgcaagcggggcagttgctgatggtgatcgaaccggcggagcattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (31)   

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