KEGG   Dickeya solani IPO 2222: A4U42_14405
Entry
A4U42_14405       CDS       T04410                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
dso  Dickeya solani IPO 2222
Pathway
dso00740  Riboflavin metabolism
dso01100  Metabolic pathways
dso01110  Biosynthesis of secondary metabolites
dso01240  Biosynthesis of cofactors
dso02024  Quorum sensing
Module
dso_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:dso00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    A4U42_14405 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    A4U42_14405 (ribD)
Enzymes [BR:dso01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     A4U42_14405 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     A4U42_14405 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: ANE76418
Position
3337777..3338889
AA seq 370 aa
MATYSDEFYMARALELARRGRFTTAPNPNVGCVIVRDDEIVGEGYHQKAGEPHAEVHALR
MAGDKARGATAYVTLEPCSHHGRTPPCADALIAAGVARVVAAMQDPNPQVAGRGLHRLQQ
AGIEVFHSVLMEQAEKINRGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSPQSR
QDVQRFRAQSSVILSSSATVLADDPSLTVRWSELDADTQRFYPENAVRQPVRVIVDSQSR
VTAQHRLVSQPGQTWLARPRQDGQTWPDGVEQLEMPLHGGGIDLVALMMTLGKRQINTVW
VEAGPRLAGALLQAGVVDELIVYLAPKLLGDAARPLCVLPGLEQLSQAPAFAMTDVCQLG
PDLRLTLKPQ
NT seq 1113 nt   +upstreamnt  +downstreamnt
atggctacatactctgatgaattttacatggctcgcgcgctggaacttgctcgccgcggg
cgcttcacgacggcgccgaatccgaatgtcgggtgcgtgatcgtcagagatgacgagatc
gtgggggaagggtatcaccagaaagcgggtgaaccgcatgcggaagtgcatgcgctgcgc
atggccggcgataaagcgcgcggcgccacggcgtatgtgacgcttgagccgtgcagtcat
cacggccgtacgcctccttgcgccgatgcgttgatcgcggccggcgtggcgcgggtcgtg
gcggcgatgcaggaccccaatccgcaggtggccggtcgcggtctgcaccgtctgcaacag
gccggcatcgaggtgttccatagcgtgttgatggaacaggcggaaaaaattaaccgcggc
tttctgaaacggatgcgcaccggcttcccttatgtgcagcttaaactcggcgcctcgttg
gatggccgtacggcaatggcgtccggcgaaagccagtggatcacttcgccgcagtcccgt
caggatgtacagcgtttccgggcgcagagctcggtgatcctcagcagcagcgccaccgtg
ctggcggatgacccgtcgctgaccgtgcgttggtcggaactggatgcggatacccagcgg
ttttatcctgaaaacgccgtgcgccagccggtgcgcgtgattgttgatagtcagtcgcgc
gtgactgcgcagcatcgtctggtgagccagccggggcaaacctggctggcgcgtccgcgt
caggatggtcagacatggccagacggtgtggagcagctggagatgccgctgcacggcggc
ggcatcgatctggtcgccctgatgatgacgctgggcaaacgccagatcaatacggtgtgg
gtggaagcgggcccccgtctggccggcgctttgctgcaggccggtgtggtggatgaattg
attgtttatctcgcgcccaaattattgggggacgcggcccggccgctgtgcgtgctgccg
ggattggaacagctgtcgcaggcgcccgcgtttgcgatgacggacgtctgtcagctgggg
ccggatctccgcctgacgctgaagccgcaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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