KEGG   Dickeya solani IPO 2222: A4U42_15995
Entry
A4U42_15995       CDS       T04410                                 
Name
(GenBank) type VI secretion protein IcmF
  KO
K11891  type VI secretion system protein ImpL
Organism
dso  Dickeya solani IPO 2222
Pathway
dso03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dso00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    A4U42_15995
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dso02044]
    A4U42_15995
Secretion system [BR:dso02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   A4U42_15995
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical Wzy_C_2 AAA_16
Other DBs
NCBI-ProteinID: ANE76705
Position
3696753..3700250
AA seq 1165 aa
MLKIIITFLRQQLPKLKPSWLLLGVVVWVVALVLAWWLGPRLTLGDMRPLQSVWGRVVFT
LVWLWLGFAYSAWHVWRRVQQLRAERREQQIIEQDPLQVYVDSQQTFLDRWLQAFQTQLG
KKALYAMPWYLAIGLSGSGKSSLIHRANTANKLNPKLDAELRDVAGGQQVNSWVGESAVI
WDPSGQLLAQPEIGAEPSAGRHARLWQHLLQWLSLNRRRQPLNGLVLTIDLSWLAQASVS
ERKAYAQVMRARLQEIAVNINTRLPLYVALTRLDMLRGFDVVYRSLNREARQAVLGVTFT
PQASHGKGWLEELERFWDDWIANLNNNLPEMLLTQSDRGVRNTLFTFVRQLAGLKDYVTE
VLNETLATGDDRAFLVRGVYVSSVYQQGVPFDAFAQSASRRYQLPEPINAAMRGESNTFF
VQKLFPEVIFPEASLAGENRLHSLYRRRRMSIGITCMVLFGLAMIGSWHHFYRVNEEAGR
NVLTKAQAFIGTNELEGQAGYGYQQLPRLNLIRDATLSFGNYHERTPMLADLGLYQGDKI
GPYVEGSYLQMLNQRFLPAVMQGLLEDLNQAPAGSEQKLTILRVMRMLDDASGRNKTLVE
QFMALRWQKAFPGQGKVQEQLMQHLDYALDHTDWHQSREQKDTVAISTFAPFVDPIASAQ
RELSKLPMYQRVYQSLVMKATQVLPPDLAIRDEVGPTFDSVFTLRNDKAGTVPRLLTYPG
FSDFYLKQDKTLLDLTALDAWVLGQRERAHLSEADRKEILRQVNDRYITDYINQWQKALA
NIDVQPLESPEQALNILTDITGNDQPFQRVLTTVSDNTRIRKLADDENDTAQGINTRIGR
PFMTINAALSGRGEQGPLVQEVNQKLTDLYHYLDQIVNATDPGQAALKAVQARQGNKFAD
PVFALQQYARSLPAPLDRWVGQLAGESASLVTGLAMSSLNQEWMDKVVTPFNEKLADRYP
FNPSSDKDVPLSEMERFFAVGGTLDSFYQTNLKSIMDSGMLEGEGASPLQTELVKQLDRA
TRIRQTLFNAQGSLEIHFVVEPVELTANKRRSVLNLDGQLLEYSHGRRTKTPLVWPNSMR
DGAESKLTLVPDDRERSPRSLSFTGPWAMFRLLTNGQLTQVNDNTFDVRFSLEQGGMTYR
VYTDASHNPFAGGLFSQFKLPDSLY
NT seq 3498 nt   +upstreamnt  +downstreamnt
atgttgaaaataatcattacctttttgcggcaacagctgccgaaactgaaaccttcctgg
ctgttgctgggggtggtggtatgggtggtggcgctggtgctggcctggtggctgggaccg
cgtctgaccctcggcgacatgcgcccgctgcaaagcgtgtggggccgcgtggtgttcacg
ctggtctggctgtggctgggctttgcctacagcgcctggcacgtctggcgccgggtgcag
caattacgcgcggaacggcgtgaacagcagattatcgagcaggacccgctgcaggtatac
gtcgacagccagcaaacctttctggaccgctggttgcaggcgtttcagacccaactgggc
aaaaaggcgttgtacgccatgccctggtatctggcgatcggcctgtccggcagcggcaaa
agcagcctgattcatcgcgccaacacggccaacaaactcaacccgaaactggatgcggaa
ttgcgcgacgtggcgggcggccaacaggttaacagctgggtcggcgagtcggcggtgatc
tgggacccaagcggtcaactgctggcccagccggaaatcggcgcggagccgtcggccgga
cgccatgcccgcctgtggcaacacctgttgcagtggctgagcctcaaccgtcgccgccag
ccgctgaacggactggtgctgactatcgatctgtcctggttggcgcaggccagcgtatcg
gagcgtaaagcgtatgcgcaggtgatgcgcgcccgcttgcaggaaattgccgtcaatatc
aatacccgcctgccgctgtatgtggcgttgacccgtctggacatgctgcgcggttttgac
gtggtgtaccgctcgctgaaccgggaagcgcgtcaggcagtgctgggggtgacgttcacg
ccgcaggccagccacggcaaaggctggctggaagagctggagcgcttttgggacgactgg
atcgccaacctcaacaataacctgccggaaatgctgctcacgcagtcggatcgcggcgtg
cgcaatacgctgttcaccttcgtgcgccagctagccgggttgaaggattacgtgacggaa
gtgctgaacgaaacgttggcgaccggcgacgaccgcgcgttcctggtccgcggcgtgtat
gtcagctcggtgtaccagcagggcgtgccgttcgacgccttcgcccagtccgcttcccgg
cgttatcagttgccggagccgatcaacgccgccatgcgcggcgagtcgaatacgttcttc
gtgcagaagctgttcccggaggtgattttcccggaagccagtctggcgggggaaaaccgg
ctgcacagcctctatcgccgtcgccgcatgagtatcgggattacctgcatggtgttgttc
gggctggcgatgatcggcagctggcaccatttctatcgggtgaacgaagaggccggccgt
aacgtgctgaccaaggcacaggcgttcatcggcaccaacgaactggaaggacaggcgggg
tacggctatcagcaactgccgcgtctgaacctgatccgcgacgccaccctgtcgttcggc
aactaccacgaacgcacgccgatgctggccgacctcgggctgtatcagggcgataagatc
ggcccttacgtggaaggctcttacctgcaaatgctcaaccagcgtttcctgccggcggtg
atgcaggggctgctggaggacctgaatcaggcgccggccggcagcgagcagaaactcacc
attctgcgggtgatgcggatgctggacgacgcctccgggcgtaacaagacgctggtggag
cagttcatggcgctgcgttggcagaaggcgtttccggggcagggtaaggtgcaggaacaa
ctgatgcagcatctggattacgcgctggatcataccgactggcaccagtcccgcgagcag
aaggatacggtggcgatctccaccttcgcgccgttcgtggacccgatcgccagcgcccag
cgcgagctgagcaagttgccgatgtaccagcgcgtctaccagagtctggtgatgaaggcg
acgcaggtgctgccgccggatctggcgattcgcgacgaagtggggccgacgttcgattcg
gtcttcaccctgcgcaacgacaaggcgggcacggtgccgcggctgttgacctatcccggt
ttcagcgatttctacctcaagcaggataaaacgctgctggacctgaccgcgctggatgcc
tgggtgctgggtcagcgtgagcgcgcccacctgagcgaggccgaccgcaaagagatcctg
cgtcaggtgaacgaccgctatatcaccgattacatcaaccagtggcaaaaggcgctggcg
aatattgatgtacaaccgctggaaagcccggaacaggcgttgaacatactgaccgatatt
accggtaacgaccagccgttccagcgcgtgctgaccacggtgagcgacaacacccgcatc
cgcaagctggcggatgacgagaacgacaccgcgcagggcatcaatacccgcatcggtcgc
ccgttcatgaccatcaacgccgcgctgagcgggcggggcgagcaggggccgctggtgcag
gaggtcaatcagaagttgaccgatctctaccactatctggatcagatcgtgaacgccacc
gatccggggcaggcggcgctgaaagcggtgcaggcgcgtcagggcaacaagttcgccgat
ccggtgtttgcgttgcagcagtatgcccgtagcctgccggcgccgctggaccgttgggtc
ggccaactggcgggagaaagcgccagtctggtgaccgggctggcgatgtcgtcgctcaat
caggagtggatggacaaggtggtgacgccgtttaacgagaaactggcggaccgttacccg
ttcaacccgtcttccgacaaggatgtgccgctgtccgaaatggaacgcttctttgccgtg
ggcggtacgctggacagcttctaccagaccaacctcaagtcgattatggacagcggtatg
ctggagggggaaggcgcgtcgccgttgcagacggagctggtgaaacagctggatcgcgcc
acccgtatccgccagacgctgttcaatgcgcagggcagcctggaaatacactttgtggtg
gaaccggtggagctgaccgccaacaagcgtcgcagcgtgctgaatcttgacggacagttg
ctggagtacagccacggacgccggaccaaaacgccgctggtgtggccgaacagtatgcgc
gacggcgccgaaagcaagctgacgctggtgccggatgaccgcgaacgctcgccgcgcagc
ctgagcttcaccggcccgtgggcgatgttccgcctgctgaccaacggccagctgacgcag
gtgaacgacaataccttcgacgtgcgtttctcgctggaacaaggcggcatgacctatcgc
gtctataccgacgccagccacaatccgtttgccggtggtctgttcagccagttcaaactg
cctgattctctctattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system