KEGG   Dichomitus squalens: DICSQDRAFT_149850
Entry
DICSQDRAFT_149850 CDS       T03133                                 
Name
(RefSeq) replication factor A protein 3
  KO
K10740  replication factor A3
Organism
dsq  Dichomitus squalens
Pathway
dsq03030  DNA replication
dsq03420  Nucleotide excision repair
dsq03430  Mismatch repair
dsq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DICSQDRAFT_149850
   03420 Nucleotide excision repair
    DICSQDRAFT_149850
   03430 Mismatch repair
    DICSQDRAFT_149850
   03440 Homologous recombination
    DICSQDRAFT_149850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dsq03032]
    DICSQDRAFT_149850
   03400 DNA repair and recombination proteins [BR:dsq03400]
    DICSQDRAFT_149850
DNA replication proteins [BR:dsq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    DICSQDRAFT_149850
DNA repair and recombination proteins [BR:dsq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     DICSQDRAFT_149850
   MMR (mismatch excision repair)
     DICSQDRAFT_149850
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     DICSQDRAFT_149850
SSDB
Motif
Pfam: Rep_fac-A_3 Myosin_N CbiG_N
Other DBs
NCBI-GeneID: 18836868
NCBI-ProteinID: XP_007369900
JGI: 149850
UniProt: R7SMN5
Position
Unknown
AA seq 106 aa
MSTNRSPRVNKTLMAKYSGQTVRLIAKLISLKDDTAIVETSDGGQVEVKLLRNFSHGSTY
LEVIGQVQDERTIKMVGCVSLGDDVDMKLVDQIVQIWHDSRFAKVF
NT seq 321 nt   +upstreamnt  +downstreamnt
atgtcgaccaaccgttcaccgcgcgtcaacaagacgcttatggccaagtactcagggcag
acagtcaggctcatcgccaaattaatctcgctcaaagatgataccgctattgtggagacc
tcagatggaggacaagttgaagtgaagctgcttaggaacttcagccatggaagcacgtat
ctagaggtgattggccaagtccaggatgagcgaacaatcaaaatggttggctgtgttagc
ttgggggatgatgttgacatgaagctcgtggaccagattgtgcaaatatggcacgattcg
aggtttgctaaggtgttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system