KEGG   Dichomitus squalens: DICSQDRAFT_182876
Entry
DICSQDRAFT_182876 CDS       T03133                                 
Name
(RefSeq) coatomer subunit alpha-2
  KO
K05236  coatomer subunit alpha
Organism
dsq  Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dsq04131]
    DICSQDRAFT_182876
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dsq04147]
    DICSQDRAFT_182876
Membrane trafficking [BR:dsq04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    DICSQDRAFT_182876
Exosome [BR:dsq04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   DICSQDRAFT_182876
  Exosomal proteins of bladder cancer cells
   DICSQDRAFT_182876
SSDB
Motif
Pfam: Coatomer_WDAD COPI_C WD40 ANAPC4_WD40 NBCH_WD40 DUF5074 Clathrin Ubiquitin_3
Other DBs
NCBI-GeneID: 18841239
NCBI-ProteinID: XP_007369315
JGI: 182876
UniProt: R7SQA6
Position
Unknown
AA seq 1206 aa
MSVMLTKFESKSNRVKGLSFHPTQPLLAASLHNGSVQLWNYRMGVLVDRFEEHEGPVRAV
AFHPSRALLVTGGDDYKIKVWDIRPTNRRCLFTLHGHLDYIRTVQFHHEMPWILSCSDDQ
TIRIWNSTSRNCIAILTGHSHYVMSAQFHPKEDLIVSASQDQTVRVWDISGLRKSTPNTA
PGTFDTFDNFSTVKYVLEGHDRGVNWASFHPTLPLIVSAADDRQIKIWRMSETKAWEVDS
CRGHFNNVSTALFHPKHELIVSCGEDKTVRVWDLTKRSAVQTFRREHDRFWVLAAHPELN
LFAAGHDNGLIVFKLERERPAFAMHGDTVYYVRDKYVRSYDINTGSDIGLLSVRKFGSPY
VPPRTLSYNPAERAVVLTISSDNGLFELTTLPKDAIGEVKDSSTDGKRGSGQAAIFVARN
RFAVLNKATQLIEVRDLSNSVVKSIKPPVQTNEIFYGGTASLILSSSASVVLYDIQQQKT
LAEITTPPVKYVVWSADGSLVALLSKHTITIANKNFTQHTLIHETIRIKSGAWDDTGVFI
YSTLNHIKYCLAQGDHGVICTLDNPVYLTRVKGKTVHCLDRSARPRTITIDPTEYRFKLA
LLRNNHEEMLYIIRTSNLLGQSIIAYLQQKGFPEIALHFVQDKNTRFDLAIECGNLDVAL
ETAQSIDRPECWERLAQQALKQGNHKIVEKAYQRTKNFDRLSFLYLATGSTDKLTKMQKI
ADARGDPMSRFHNALYAGDVVGRIAVLRDVGMYSLAYLTAKTNGLDDVALEILEVAGLNE
ADVDDVPSFGHSTLRPPPVITETTNLNWPTLSTGESFFDKALANGNLDGGDVPYVNGVDT
GAAASAALDDWAKDEEAGEDIAAEEGAWDLDADAEEAEEEKEEEAAEEEVDLGAGATPGV
AETELWIRNSPFAADHVAAGSFDSAMQLLNRQFGIVNFSHLKPAFLSAYRSSHVYLSPVA
SLPPLQLHLRRDPEESSPSRVLPVAVRTLASIRTELSEGFRAVSGNKLPDAQVVFRSVLR
SLLLVPISTDNDAKEWRDVVTLSREYLLGVTIEIERRRVAQEDPDNVKRSLELAAYFTHC
RLQPAHLQIALRSAIGVFAKANNHATAAKFARRLLELNPDPKIVAQARQRIAAGDRNPRN
AVDIDYDEFTEFEVCAASFTPIYKGSPAVRCPYTDAAYLPQYKGKLDPLTELTEIGASSA
GLPAPR
NT seq 3621 nt   +upstreamnt  +downstreamnt
atgtcggtaatgctcacgaagtttgagtccaagagcaatcgcgtcaaaggactctcattc
cacccgactcaaccgctactggccgcatcgctgcacaacgggagtgtccagttatggaac
tatcggatgggcgtacttgttgacaggtttgaggagcacgaaggtcccgtccgagctgtt
gcgttccatcccagccgcgcgctcctggtaactggaggagacgactacaagatcaaagtc
tgggacatccggcccacaaaccgccgctgcctcttcacgcttcacggacatctcgactac
attcgcactgtacagtttcatcacgagatgccatggattctctcctgctccgacgatcag
accatccgtatctggaacagcacctcgcgcaattgtattgcaatcctcaccggccactcg
cactacgtgatgtctgcgcagttccaccccaaggaggacctcattgtgtccgcttcacaa
gaccagacagtgcgcgtctgggacatctccggtctgcgcaagagcaccccaaacacggct
cccggtacctttgatacctttgacaatttctccaccgtcaagtacgtgctcgagggccac
gatcgcggcgtgaactgggcctccttccacccaacgctccccctgatcgtctctgcggca
gacgaccgtcagatcaagatttggcgtatgagcgagacgaaagcttgggaggtcgattcg
tgcaggggccacttcaacaatgtctccactgcgcttttccacccgaagcatgagctcatt
gtatcgtgcggtgaggacaagactgtgcgcgtctgggacctgacaaagcgctccgctgtg
cagacgttcaggagagaacacgaccgcttctgggtgctcgcggctcacccggagctcaac
ttgttcgctgctggacacgacaacggacttatcgtcttcaagctcgagcgtgagcggccg
gccttcgcgatgcacggcgacacggtatattacgtgcgcgataagtacgtgcgctcgtac
gacatcaacaccggctcggacattgggctcttgagcgtgcgcaagtttggcagtccttac
gtccctccgcgcacgctcagctataacccagctgagcgcgcggtggtgctcacgatctcg
tcggacaacggcctcttcgaactcaccacccttcccaaggacgcgattggtgaggtgaag
gactcgtcgacagatggcaagcgtgggagtggtcaggccgcgatcttcgtggcgaggaac
aggttcgcagtgcttaacaaggccacccagcttatcgaggttcgcgacctatccaactcg
gtcgttaagagcatcaagcctcctgttcagacgaacgaaatattctatggcggcactgcg
agcctgattcttagctcctcagcgtcggtagttctctatgatatccagcagcagaagact
ctcgccgagatcaccacgccgccagtgaagtatgtcgtgtggagcgcggatggttcgctc
gtagcactactcagcaagcacaccatcacgatcgcgaacaagaacttcacgcagcacacg
ctcatccacgagacgatccgtatcaagtctggcgcttgggatgatacaggcgtcttcatc
tactccacgctcaaccacatcaagtattgcctggcgcaaggagaccacggggtgatttgc
accctggacaaccctgtatatcttacccgggtgaagggtaagacggtccactgcctcgac
cggtctgcacgcccacgtacgatcacgatcgaccccacggagtaccggttcaagcttgcg
ctgctacgaaacaaccatgaagagatgctatacattatccgcacgtctaacctgttggga
cagagcatcatcgcgtatctgcaacaaaagggattccccgagatcgcgttgcactttgtg
caagacaaaaacacgcggttcgacctggcgatcgaatgtgggaatctggatgttgcactg
gagacagcgcagagcatcgaccggcccgagtgctgggaacgtcttgctcagcaggctctg
aagcaaggcaaccacaagattgtggagaaggcataccagcggacgaagaacttcgatcgg
ctgtcgttcctatacttggctaccgggagtacggacaagctgacgaagatgcagaaaatc
gccgatgcgcgtggggatcccatgtctcggttccacaatgcactttatgctggtgacgtc
gtcggccgtatcgccgttctgagggacgtcggaatgtattctttggcgtacctgaccgcg
aaaacgaatgggttggacgacgttgcgttggagatcctcgaggtggcgggcctgaacgag
gccgatgtcgatgacgttccttcattcgggcattcgacgctccgtccgccacccgtgatc
actgagacgacgaacctgaactggcctacactgtcgactggagagagcttctttgataag
gcgctcgcaaacggcaacctggatggcggggatgtaccatacgtcaatggcgttgataca
ggtgcggctgcgtccgctgcactcgatgactgggcgaaggacgaggaggcaggcgaagac
atcgcagccgaagagggtgcttgggacctcgatgcggatgcggaagaagccgaagaagag
aaggaagaagaagctgcggaggaagaggtggacctgggtgctggtgcgacgccaggagtg
gccgagacggagttgtggatacgtaattcgccgttcgcagcggaccacgttgcagctggc
tcgttcgacagcgcgatgcagctgttgaatcgtcagtttggaatcgtcaacttttcgcat
ctcaagccggccttcctctcggcttatcgatcttcacatgtgtacctctcccctgtggcg
tctctccctcccctgcagctgcacttgaggcgtgatcccgaggagtcgtccccgagtcgt
gtgctccctgttgctgtccggactctggcgtcgatccggacggaactctcggagggattc
cgcgccgtatctggcaacaagctgccagacgcgcaggtggtgttccgttccgtgcttcgt
tcgcttctgctggttcctatctcgacggataacgacgccaaggagtggcgcgacgtggtg
actttgtcacgcgagtacctgctgggtgtcactatcgagattgagcggaggagagttgct
caagaagaccctgacaacgtcaagcgtagtttggagcttgccgcgtacttcacgcactgc
aggttgcagcccgcgcacttgcagatcgctttgcggagcgcaattggtgtgttcgcgaag
gcgaacaaccacgcgactgccgccaagtttgcaagacggttgttagagctaaaccctgac
ccaaagatcgtcgcgcaggcgaggcaacgtatagcggccggtgaccgcaaccctcggaat
gcggtggacatcgactacgacgaattcaccgaatttgaggtttgcgcggccagcttcacg
ccgatctacaaaggttctcccgctgtccgttgcccctacacggacgctgcctaccttcca
caatacaagggcaagcttgaccctcttacggagctgacggaaatcggggcgtcgtctgct
ggtctgcctgcgcctcggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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