KEGG   Dichomitus squalens: DICSQDRAFT_50013
Entry
DICSQDRAFT_50013  CDS       T03133                                 
Name
(RefSeq) t-SNARE
  KO
K08486  syntaxin 1B/2/3
Organism
dsq  Dichomitus squalens
Pathway
dsq04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    DICSQDRAFT_50013
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dsq04131]
    DICSQDRAFT_50013
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dsq04147]
    DICSQDRAFT_50013
Membrane trafficking [BR:dsq04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    DICSQDRAFT_50013
Exosome [BR:dsq04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   DICSQDRAFT_50013
  Exosomal proteins of other body fluids (saliva and urine)
   DICSQDRAFT_50013
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 Use1 DUF2207_C SKA1 MCPsignal Prominin Tweety V-SNARE VitD-bind_III DUF6548 Laminin_II DASH_Dam1 PBP1_TM UL45 TPR_2 DUF4743 LMBR1 Arc_PepC_II Spectrin COG6_N
Other DBs
NCBI-GeneID: 18842224
NCBI-ProteinID: XP_007361271
JGI: 50013
Position
Unknown
AA seq 260 aa
MHTQISSIQDDIRTFNDNVNRISDLHSRSLNTTDDVAGQRVNQQLEDLVADTSALSDVLR
RRIKALQKQGGTGRNGEIRKQQTGLVKQKFMEAIQNYQTVEQQYRQRYKQRLERQYKIVK
PDASPEEVKAVVDDDQGGQIFSQALMNSNRYGEARSAYREVQERHADIKKIERTLTELAQ
LFNDMSILVEQQDEQITVINDTVKEVEKDVETGLNYTNKAVNSARAARKKRWICFILCLI
IIIIIAIVVAVVVLQNQHKN
NT seq 783 nt   +upstreamnt  +downstreamnt
atgcatacgcagatctcttccattcaagatgacatccgtaccttcaacgacaacgtcaac
cgcatctccgacctgcactcgcgctcgctcaacacgacggacgatgtggcgggccagcgc
gttaaccagcagcttgaggacctcgtcgcggacaccagcgcgctcagcgacgtgctccgg
cggaggatcaaagcgctgcagaaacagggtggtactggtagaaatggggagatccggaag
cagcagactggtctggtgaagcagaagttcatggaggcgattcaaaactaccagaccgtc
gagcagcagtaccggcaacggtacaagcaacgtctggagcgccagtacaagattgtcaag
cccgatgcgtctccagaggaagtcaaggctgtcgttgatgatgatcaaggtggtcagatc
ttcagccaggcgttgatgaactcgaaccgttacggcgaggctcggtccgcgtaccgggaa
gtgcaggaacgtcacgcggacatcaagaagattgagcggacactgacagaacttgctcaa
ctgtttaatgatatgagcatcttggttgaacagcaagacgagcagatcactgtgatcaac
gacaccgtcaaggaggttgagaaagacgtcgagacaggcctaaactataccaacaaggct
gtcaattcggcgcgtgcagcgcgcaagaagcggtggatttgcttcatcctctgtctcatc
atcatcattatcatcgctattgtggttgcggtcgtcgtgttgcagaatcagcacaagaac
tag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (22)   
   Pfam (22)   
All databases (34)   

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