KEGG   Desulfobacula toluolica: TOL2_C36300
Entry
TOL2_C36300       CDS       T02268                                 
Symbol
deaD
Name
(GenBank) DeaD: cold-shock DEAD box protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
dto  Desulfobacula toluolica
Pathway
dto03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dto00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TOL2_C36300 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dto03019]
    TOL2_C36300 (deaD)
   03009 Ribosome biogenesis [BR:dto03009]
    TOL2_C36300 (deaD)
Enzymes [BR:dto01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     TOL2_C36300 (deaD)
Messenger RNA biogenesis [BR:dto03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     TOL2_C36300 (deaD)
Ribosome biogenesis [BR:dto03009]
 Prokaryotic type
  rRNA helicases
   TOL2_C36300 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII P-loop_SecA PBD CMS1 AAA_19 PARM
Other DBs
NCBI-ProteinID: CCK81787
UniProt: K0NS32
Position
4234293..4236089
AA seq 598 aa
MPQNNLPLTGFDEMNLSPPVFSALQDVGYETPTPIQAMTIPHLIRNKDVLGQARTGTGKT
AAFALPLLSRIDLDNKRPQVLVLTPTRELAIQVAESFKTYGARMKGLNVLSVYGGQSYGI
QLNQLKKGVHVVVGTPGRLMDHMRKKTVSFADLFCVILDEADEMLHMGFIDDVEWILDRT
PPDSQTALFSATMPRPIQKIAQKYLTSPEEFFIKPDNTELNTIKQQYWMVNGAKKAHALT
RILEAVSFDGVIVFVKTKTATLELAKILEDKGFKAEALNGDLAQNARERTVNRLKNSHID
ILVATDVAARGLDVDRISHVINYDMPSKVDPYVHRIGRTGRAGRTGEAILFVSRNERWML
KVIEKATKQKIQEISLPSNKTINKKRIADFKQAITQTLESKDLNVFQELLEGYAQEQDIP
VVQVAAALAKLAHGDSPFLLPADKDKKTATAKPARKKQAAPKNISNNRNTTERTNKPGNT
ARKQTPKPMKKQTSSQKANITPTKETNIAPQEQASVPPLEKGMERYRIEVGRLHGVQAGN
IVGAIANEAGLDSKHIGHININQDFSFVDLPYGMPKEIFRLLKRTWVKSQQMSISKCA
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgccccagaacaacttgcccttgaccgggtttgacgaaatgaacttgagcccccctgtg
ttttctgcattgcaggatgtgggctatgaaactccaaccccgatccaggcaatgaccatc
ccccatctgatccggaacaaagatgtgctgggccaggcccggaccggcaccggcaaaaca
gccgcctttgccctgccactgctatcccggattgaccttgacaacaaacggccccaggta
ttggtattgacccccacccgggaactggccatccaggtggcagaatcctttaagacctat
ggtgcaagaatgaaagggctgaacgtattgtccgtttacggaggacaaagttacggaatt
cagctgaaccagctcaaaaaaggcgtccatgtggtcgtgggaacacccggccggctcatg
gatcatatgcgaaaaaaaaccgtgtcatttgcagaccttttttgtgtaatcctggatgag
gcagatgaaatgcttcacatgggctttattgatgatgtggaatggatactggacagaacg
ccacccgattcacaaaccgctcttttctcagccaccatgcccaggccaatccaaaagatt
gcccaaaaatatcttacatcaccggaagaattttttatcaaaccggacaacacggaactt
aataccatcaaacagcaatactggatggtcaatggagctaaaaaagcgcacgccctgacc
cgtatactggaggctgtctcctttgacggggtgattgtgtttgttaaaaccaaaaccgca
acacttgagctggcaaaaattcttgaagacaaaggattcaaagccgaggccctgaacggg
gatcttgcccagaatgcaagagaacgaaccgttaaccggcttaaaaacagccatatcgac
attctggtggcaactgatgttgcggccaggggtcttgatgtggaccgaatctcccatgta
attaattatgatatgccttccaaggttgacccctatgtccacaggatcggcagaaccggc
agagccggccggacaggagaagccatcctgtttgtttcccgaaatgaacgctggatgctg
aaagttattgaaaaagccacaaaacaaaaaattcaggaaatcagcctgccctccaacaaa
accattaataagaagagaatagccgactttaagcaggccattactcaaaccctggaatca
aaagacctgaatgtttttcaagaactgcttgaaggatatgcccaggaacaggacatccct
gttgtacaggttgcagctgcccttgcgaaattagcccatggagacagccctttcctgttg
cctgcggataaagacaaaaaaaccgcaacagctaagccagcccgaaaaaaacaggctgcc
ccgaaaaacatttcaaataacaggaacacgacagaaagaacaaacaagccgggtaataca
gcaagaaaacaaacacccaaaccaatgaaaaaacaaacctcctcccaaaaagcaaatatt
actcccacaaaagaaacaaacattgctccccaggaacaagcaagtgtgccacccctggaa
aaaggcatggaaagataccgaattgaagtgggacgtctccacggggtccaggctggaaat
attgtcggagccattgcaaatgaagccggtcttgacagcaaacacatcggccatataaat
atcaaccaggatttttcctttgtggatcttccatacggtatgccaaaagaaattttcagg
ctcctgaaaagaacctgggtaaaatcccagcaaatgtcaatctcaaaatgtgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (38)   

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