KEGG   Dickeya chrysanthemi: Dd1591_0117
Entry
Dd1591_0117       CDS       T00930                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
dze  Dickeya chrysanthemi
Pathway
dze03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dze00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Dd1591_0117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dze03400]
    Dd1591_0117
Enzymes [BR:dze01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Dd1591_0117
DNA repair and recombination proteins [BR:dze03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Dd1591_0117
SSDB
Motif
Pfam: PriA-like_WH PriA_3primeBD PriA_C DEAD ResIII Helicase_C PriA_CRR AAA_30 TrwB_AAD_bind zinc_ribbon_15 zinc-ribbons_6 AAA_19
Other DBs
NCBI-ProteinID: ACT05010
UniProt: C6CG27
Position
complement(135682..137880)
AA seq 732 aa
MPVVQVALPVPLTRTFDYRLAPGVTPPVAGVRVSVPFGNRKMIGIVTSLSAGSELPLAQL
KPLHDVLDDAPLFPDSLWRILLWAAEYYHYPLGEVLFHALPILLRQGKPAHSAPLWQWFA
TEQGRATPLNALKRAPKQQQALASLLQGPIYRHQVAEAELTEAALQALREKGLSELRAQP
RHVQDWRNTFSLAGERLRLNTEQATAVGAIRSEDDHFAAWLLAGITGSGKTEVYLSVLEN
ILAQGKQALVLVPEIGLTPQTIARFRDRFNAPVEALHSGLNDSERLSVWLRARQGEAAIV
IGTRSALFTPFARLGLIVIDEEHDGSYKQQEGWRYHARDLAVFRARQENIPIVMGSATPA
LETLYNVQIGKYRQLRLSKRAGNARLAQQHLLDLKGLPLTSGLSQPLINRIRHHLAEDNQ
VILFLNRRGFAPVVLCHECGWIAECQRCDSYYTLHQHQRMMRCHHCDSQRPIPQQCPQCG
STHLVPVGLGTEQLEQVLPALFPDAPITRIDRDTTSRKGALEQQLAQVRQGGARILIGTQ
MLAKGHHFPDVTLVALLDVDSALFSADFRATERFAQLYTQVSGRAGRAGKAGEVVLQTHH
PEHPLLQTLLHQGYDAFASQTLKERQSVFLPPFTSHVLFRADDHDNQQASLFLQQLRNLL
EASPLRDDALWLMGPAPALQPKRAGRFRWQLLLQHPSRATLQRLIRNSMLLIDTLPQTRK
VKWVMDVDPTDS
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgcccgttgttcaggttgccttgccggtaccgctgacgcgaacatttgattaccggttg
gcgccgggcgtgacgccaccggtagccggcgtgcgggtaagcgttcccttcggcaaccgc
aagatgatcggcatcgtgacgtcgctgagcgccggcagcgaactgccgctggcacaactc
aaaccgctgcatgacgtactcgacgacgctccgctatttcctgacagcctgtggcgcatt
ctgctgtgggcggcggagtattatcattatccgcttggtgaagtgttgtttcacgccctg
ccgattttactccgacagggaaaaccggcgcacagtgcgccgctctggcaatggtttgcc
accgagcaagggcgcgccacaccgctgaatgcgctgaaacgcgcgccgaagcaacagcag
gcgctggcctcgctgttacaggggccaatttatcgtcatcaggtggcggaagccgaactg
accgaagccgcgttgcaggcgctacgcgaaaaaggactgagcgagctgcgcgcgcagccc
aggcacgtgcaggactggcgtaatactttcagcctcgcgggcgaacgcttgcgtctcaat
accgaacaggccaccgcggtcggcgccatacgcagtgaagatgaccattttgccgcctgg
ctgctggcgggcatcaccggttccggcaaaaccgaggtttacctcagcgtgctggaaaat
attctggcgcagggcaagcaggcgctggtgctggtgccggaaatcggcctgacgccgcaa
accatcgcccgttttcgcgatcggttcaacgccccggtagaagcgctgcactccggtctg
aacgacagcgaacggctgtcggtatggctgcgagcacggcaaggtgaagcggccatcgtg
atcggtacccgttccgcactgtttaccccctttgcccggctggggctgatcgtcatcgac
gaagagcacgacggctcttacaagcaacaggaaggctggcgttaccatgctcgcgatctg
gcggtgttccgcgcccgacaggaaaatattcctatcgtgatggggtccgccacgcccgca
ttggaaacgctctataacgtacagattggcaaataccgccagctacgtctgagcaaacgc
gccggcaatgccagactggcgcagcaacacttgttggatttgaaagggctaccgctgacc
agcggcttgtcgcagccgttgataaaccgcatccgccatcatctggccgaagacaatcag
gtcattctgttcctgaatcgtcgcggtttcgcgccggtggtgctgtgccatgaatgcggc
tggatcgccgagtgccagcgttgcgacagctactacaccttgcaccaacatcagcggatg
atgcgctgccaccattgcgacagccaacgcccgataccgcagcagtgcccgcagtgcggc
tccacccatctggtgccggtaggtctggggaccgaacaattggaacaggtattaccggcg
ctgtttcccgacgcccccatcacccgaatcgaccgcgataccaccagccgcaaaggtgcg
ctggaacagcaactggcgcaggttcgccagggtggcgcccgcatcctgatcggcacccag
atgctggcgaaagggcaccatttccccgacgtcacgctggtcgcgctgctggatgtcgac
agcgcgttgttctccgccgactttcgcgctaccgaacgcttcgcccagctctatactcag
gtatccgggcgcgccgggcgcgcaggcaaagcgggtgaagtcgtactgcaaacgcatcac
ccggagcatccgctgctgcaaacattgctacatcaaggctacgacgccttcgccagtcag
acgttaaaagagcgccagagcgtcttcctgccgccgtttaccagccatgtgttgttccgg
gcggacgatcatgataatcagcaggccagcctgttcctgcagcagttgcgcaatctgctg
gaagccagcccgctgcgtgacgacgcgttatggctgatgggaccggcccccgcattgcag
ccgaaacgtgccggacgtttccgctggcaactactgttgcaacacccatcgcgcgccacg
ctgcaacggctcattcgcaactcgatgctgctgatcgatacgctgccgcaaacgcgcaag
gtgaaatgggtgatggacgttgacccgaccgacagttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (22)   

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