KEGG   Equus asinus (ass): 106847167
Entry
106847167         CDS       T04645                                 
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
eai  Equus asinus (ass)
Pathway
eai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:eai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106847167 (PARN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eai03019]
    106847167 (PARN)
Enzymes [BR:eai01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     106847167 (PARN)
Messenger RNA biogenesis [BR:eai03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     106847167 (PARN)
SSDB
Motif
Pfam: CAF1 RNA_bind R3H NCBP3 RRM_1
Other DBs
NCBI-GeneID: 106847167
NCBI-ProteinID: XP_014721818
UniProt: A0A8C4PMD4
Position
14:complement(18672841..18820494)
AA seq 637 aa
MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCAFKYDYTDSKYITKSFNFYVFPKPFSRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRLQSNGAGALSYVSPNTSKCPVTIPEDQKKF
IDHVVEKIEDLLQSEEDKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIV
ISKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQF
YCPLPADLNEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKV
ESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANYLGTFLSPPKTHVSARSKLVEPFFN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS
AFVSLSQPEQVQIAVNTSKYAESYRIQTYAEYVGKKHEKQIKRKWTEDGWKEVERKRLNT
QCASYALQNHYHHANSLTATGTVGKRTLSPSRAEAGLEARVSEELSDAELEQTDSCAESL
SEGRKKAKKLKRMKKDLSPAGSLSDSSAKLFEVPDTW
NT seq 1914 nt   +upstreamnt  +downstreamnt
atggagataatcaggagcaattttaagagtaatcttcacaaagtgtaccaggccatagag
gaggccgacttcttcgccatcgatggggagttttcaggaatcagtgatggaccttcagtc
actgcattaacaaatggttttgacactccagaagaaaggtatcagaagcttaaaaaacat
tccatggactttttgctgtttcagtttggcctttgcgcttttaagtatgactacacagat
tcaaagtatataacaaagtcgtttaacttctatgttttcccgaaacccttcagtagatcc
tcaccagatgtcaaatttgtttgtcagagctcgagcattgactttctagcaagccaagga
tttgatttcaataaagttttccgcaatggaattccatatttaaatcaggaagaagaaaga
cagttaagagagcaatatgatgaaaaacgtttacagtccaatggtgcaggagctctatcc
tatgtgtctcctaacacttcaaagtgtcccgtgacgattcctgaggatcagaagaagttc
attgaccacgtggtagagaaaatagaagatttattgcagagtgaagaggacaagaacttg
gatttagagccatgtactgggttccaaagaaaactgatttatcagactttgagctggaag
taccccaaaggcattcatgttgagactttagaaactgaaaagaaagagcgatatattgtt
attagcaaagtagatgaagaagaacgcaaaagaagagagcagcagaaacatgctaaagaa
caggaagaactgaatgatgctgtgggattttctagagtcattcatgccattgctaattcg
ggaaaacttgttattggacacaatatgctcttggatgtcatgcacacagttcatcagttc
tactgccctctgcctgcggacttaaatgagtttaaggagatgacaacgtgtgttttcccc
agacttttggataccaaattgatggccagcacacaaccttttaaggatatcattaacaac
acatcccttgcggaattggaaaagcggttaaaagagacacctttcaaccctcctaaagtt
gaaagtgcagaaggttttccaagttatgacacagcttctgaacagctccacgaggcaggc
tatgacgcttatatcacaggactgtgtttcatctccatggcaaactacctaggtactttt
cttagtcctccaaaaactcatgtgtctgccagatcaaaactcgttgaacccttttttaac
aagttatttcttatgagagtcatggatatcccctatctaaacttggaaggaccagacttg
caacctaaacgcgatcacgttctccacgtgacattccccaaagaatggaaaaccagcgac
ctttaccagctttttagtgcctttggtaacattcagatatcctggattgatgacacgtca
gcatttgtttccctgagccagcctgaacaagtacaaattgctgtcaataccagcaagtat
gcggaaagctatcgcatccagacctatgctgagtacgtggggaaaaaacacgagaagcag
atcaagagaaagtggacagaagatggttggaaggaggttgagagaaagcggttaaatacc
cagtgcgcatcctatgctctgcagaatcactatcaccacgccaacagtcttacagctacc
ggcacagtaggaaagagaaccctgagtcccagtcgagcagaagctggcttggaggccaga
gtatcggaggagctttctgacgctgagcttgagcagacagattcctgtgcagaatccctc
tcagagggaaggaaaaaggccaagaaattgaaaagaatgaagaaagacctttctccagca
ggaagcctgtcggacagctctgccaagctctttgaagttcctgacacgtggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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