KEGG   Aromatoleum aromaticum: ebA4398
Entry
ebA4398           CDS       T00222                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha chain
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
eba  Aromatoleum aromaticum
Pathway
eba03030  DNA replication
eba03430  Mismatch repair
eba03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:eba00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ebA4398 (dnaE)
   03430 Mismatch repair
    ebA4398 (dnaE)
   03440 Homologous recombination
    ebA4398 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:eba03032]
    ebA4398 (dnaE)
   03400 DNA repair and recombination proteins [BR:eba03400]
    ebA4398 (dnaE)
Enzymes [BR:eba01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ebA4398 (dnaE)
DNA replication proteins [BR:eba03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ebA4398 (dnaE)
DNA repair and recombination proteins [BR:eba03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ebA4398 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 DNA_pol_IIIA_C tRNA_anti-codon
Other DBs
NCBI-ProteinID: CAI08620
UniProt: Q5P244
Position
2605567..2609061
AA seq 1164 aa
MTASHEPCFIHLRLHSEYSISDGIVQIDQAIARAAADAMPALGISDLANLFGMVKFYKGA
RGKGMKPVVGVDTWITNDADRDKPFRALLICRNRKGYGQLCELLTRAYLDNKYRSRAEMH
RQWFADGAASDLLCLSGAMGGDIGQALVNGNPDVAERLAAEWAQLFPDAFYIELQRAGHP
GTEAYIRQAVQLAGKLGLPVVATHPVQFLEPEDFKAHEARVCIAQGYVLADKRRPRDFTE
EQYFKSQDEMCALFADIPEALENSVEIARRCSLTVQLGKNFLPQFPTPEGMTLDEFLVAE
AKSGLEVRLAELYPAEAERERQRRTYEDRLKFETDTIVQMGFPGYFLIVADFINWAKENG
VPVGPGRGSGAGSLVAYSLRITDLDPLAYALLFERFLNPERVSMPDFDIDFCQDNRYRVI
EYVRSRYGKEAVSQIATFGTMASKAVVRDVGRVLDLPYGLCDRLSKLIPIEGAKPVSLAK
AYEMESQIGEMMKDGNDGESVQELWSLAEPLEGLSRNVGMHAGGVLIAPGKLTDFCPLYI
ADGDEATPVSQFDKDDVEAVGLVKFDFLGLRNLTIIELAVEYVERLTGEKPDLAALPFTD
PAAYQILKDANTTAIFQVESEGMKKLLKKLAPDRFEDIIAVLALYRPGPLGSGMVDDFIL
RKKGQQEIDYFHPDLKPCLDPTYGVIVYQEQVMQISQIIGGYTLGGADMLRRAMGKKKAE
EMAKHRETIAAGAKQKGYDPALAEQLFDLMTKFAEYGFNKSHTAAYAVVTYHTAWLKAHH
CAAFMAATMSADLDNTDTIRIFFEDAVANGVTILPPDVNASDFRFVPTDRKTIRYGLGAV
KGAGEPAVRAILAAREAGGAFRDLFDFCARVDRRAVNRRVIEALIRAGAFDLIEPSGTAD
RARLLATVGLAMEAAEQAAANAMQGGLFDLIPEAAGAAPEYVRARPWSERERLKEEKLAI
GFFLSGHPFNSFRKEVRRFVRRPLAELEPSRDLLMLAGVVMDVRTKMTGRGKMAFVVLDD
GSHVREVSVFSELFDSQRSKIVTDEVLVVEGKVSNDDFTGGLRIVADKLMTLGEARSRFA
RALQLTVNGEVKAAGGASAAADRLQGLLTPFREGGCPVRLRYRNEVAEADLPLGEGWRVR
LDDTLLDGLRQWLPADAVEVLYPN
NT seq 3495 nt   +upstreamnt  +downstreamnt
atgactgcctcacacgaaccctgtttcatccatctgcggctgcactccgaatattcgatc
tccgacggcatcgtccagatcgaccaggcaatcgcccgcgccgccgccgatgccatgccg
gccctcggcatttccgacctggccaacctcttcggcatggtcaagttctacaaaggtgcc
cgcggcaagggcatgaagccggtcgtcggcgtcgacacctggatcaccaacgacgcggac
cgcgacaaacctttccgtgccctgctgatctgcaggaaccgcaagggttacgggcagttg
tgcgaattgctgacgcgcgcctatctcgacaacaagtatcgcagccgagccgagatgcac
cggcagtggttcgccgacggcgcggcatcggatctgctctgcctgtcgggcgcgatgggc
ggggacatcggccaggcgctggtgaatggcaatccggacgtcgcggagcgactcgcagcc
gagtgggcgcagctgtttcccgacgcgttctacatcgagctgcagcgcgccggccatccc
ggtaccgaagcctatatccgccaagccgtgcagcttgcgggcaagctcgggctgccggtc
gtcgcgacgcaccccgtgcagttcctcgagcccgaggacttcaaggcgcacgaggcgcgc
gtgtgcatcgcgcagggctacgtgcttgccgacaagcgccggccgcgcgacttcaccgag
gagcagtatttcaagagccaggacgagatgtgcgcgctgttcgccgacatcccggaggcg
ctcgagaattcggtcgagattgcccggcggtgttcgctgacggtgcagctcggcaagaac
ttcctgccgcagttcccgacgccggaaggcatgacgctcgacgagttcctcgttgccgaa
gcgaaatcgggcctcgaagtacgcctcgcggagctctacccggcagaagccgagcgggaa
cgccagcgccggacttacgaggaccggctcaagttcgagaccgacacgatcgtccagatg
ggctttcccggctacttcctgatcgtcgccgacttcatcaactgggcgaaggaaaacggc
gtgccggtcgggccggggcgcggttccggcgccggttcgctcgtcgcatacagcctgcgc
atcactgacctcgacccgctcgcgtacgcgctgctgttcgagcgcttcctgaacccggaa
cgggtgtcgatgcccgacttcgacatcgacttctgccaggacaaccgctaccgcgtcatc
gaatacgtgcgcagccgctacggcaaggaggcggtcagccagatcgcgaccttcggcacg
atggcgtcgaaagcggtcgtgcgcgacgtcggtcgcgtgctcgacctgccgtacgggctg
tgcgatcgcctgtcgaagctgattccgatcgaaggcgcgaagcccgtctcgctcgccaag
gcctacgagatggagtcgcagatcggcgagatgatgaaggacggcaacgacggcgagtcg
gtacaggagctgtggagcctcgccgaaccgctcgaaggtttgagccgcaacgtcggcatg
cacgccggcggcgtgctgatcgcgccgggcaaactcaccgacttctgcccgctctacatc
gccgacggcgacgaggcgacgccggtgtcgcagttcgacaaggacgatgtcgaggcggtc
ggcctcgtgaagttcgacttcctcggcctgaggaacctgacgatcatcgagctcgccgtc
gagtatgtcgagcgcctcaccggcgagaagcccgacctcgcggcgctgcccttcaccgac
ccggccgcgtaccagatcctcaaggacgcgaacaccaccgcgatcttccaggtggaatcg
gagggcatgaagaagctgctgaaaaagctcgcccctgaccgcttcgaggacatcatcgcg
gtgctcgcgctgtaccgccccgggccgctcggctcggggatggtcgacgacttcatcctg
cgcaagaaaggccagcaggagatcgactacttccacccggacctcaagccctgcctcgat
ccgacgtatggcgtgatcgtgtatcaggaacaggtgatgcagatctcgcagatcatcggc
ggctacacgctcggcggcgccgacatgctgcgccgcgcgatgggcaagaagaaagccgag
gaaatggcgaagcaccgcgagacgatcgccgccggtgcgaaacagaaaggctacgacccg
gcgcttgccgagcagctcttcgacctgatgacgaagttcgcggagtacggcttcaacaag
tcccacacggcagcctacgcggttgttacgtaccataccgcgtggctgaaggcgcaccac
tgcgcggcgttcatggccgcgacgatgtcggccgatctcgacaacaccgacacgatcagg
atcttcttcgaggatgccgtcgcgaacggcgtgacgatcctgccgccggacgtcaacgct
tccgacttccgcttcgtgccgaccgaccgcaaaacgatccgttacggccttggggcggtg
aaaggagccggggagccggcggttcgcgcaatcctcgcggcacgggaggcgggcggagcg
ttccgcgacctgttcgatttctgcgcgcgggtcgatcggcgcgcggtcaaccgtcgcgtc
atcgaggcgctgatccgcgccggcgcgttcgacctcatcgagccgagcgggactgccgac
cgcgcgcgcttgctcgcgaccgtcgggctggcgatggaagcggcggagcaggcggcggcc
aatgcgatgcagggcgggctcttcgacctgatcccggaagcggccggggccgcgccggag
tacgtacgtgcccgcccgtggagcgaacgcgagcggctcaaggaagagaagctcgcgatc
ggcttcttcctctccggccatccattcaacagtttccgcaaggaggtgcgccgcttcgtc
cgccgcccgctcgccgagctcgaaccttcgcgggatctgctgatgctcgccggcgtcgtc
atggacgtgcgcacgaagatgaccggccgcggcaagatggcgttcgtcgtactcgacgac
ggcagtcatgtgcgcgaagtgtcggtgttctcggaactgttcgattcgcagcgcagcaag
atcgtcaccgacgaagtgttggtggtcgaagggaaggtgagcaacgacgactttaccggc
gggctgcgcatcgtcgccgacaagctgatgacgctcggcgaagcgcgctcccggtttgcc
cgtgcgctgcagctgacggtcaatggtgaggtgaaggctgcggggggcgcgagcgctgcg
gccgaccgtctgcaaggcctgctgacgccgttccgcgaaggaggctgcccggtccggcta
cgttaccgcaacgaggttgccgaagcggatctgcctctcggcgaaggctggcgcgtgcgc
ctcgacgacacgctgctcgacggtctgcgccagtggctgccggcggacgcggtcgaagtg
ctctatccgaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (33)   

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