KEGG   Endosymbiont of Bathymodiolus septemdierum: BSEPE_1297
Entry
BSEPE_1297        CDS       T04606                                 
Symbol
rnb
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
ebh  Endosymbiont of Bathymodiolus septemdierum
Brite
KEGG Orthology (KO) [BR:ebh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ebh03016]
    BSEPE_1297 (rnb)
Enzymes [BR:ebh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     BSEPE_1297 (rnb)
Transfer RNA biogenesis [BR:ebh03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    BSEPE_1297 (rnb)
SSDB
Motif
Pfam: RNB RNase_II_C_S1
Other DBs
NCBI-ProteinID: BAS68281
UniProt: A0A0P0USY9
Position
complement(1252996..1254807)
AA seq 603 aa
MKNSLVAYKGKPARITDIVESKFALEFADGATLKVREKDFRFIHPEFTTVNEDYSKADFE
MLAEFQEETLTLQEITEWLFDEYTAQNAWCVCLMVEDGLYFYWQKDRIFVRPTSQIENIQ
AKRDAEKLAAQSLTHCVENLSNNTFNEADEPYLKEIARVALNQSKTAKILAQVGVENTPD
AAYQLLLKIKYFAVDFNPYPARFAIPKDEEIAVKVPEIERVDLTHLTCYAIDNDGSNDAD
DAISIDGNTLWVHVADVANIVPSGSDLDVYAQERGSNFYLPNEIIHMLPVSVTEASALGA
TEKSDALSFSFEFDGENINNIKVMQSVVCVTNTTYEAVDEMLMANSNEDLARIKAIGEAH
KKYRDAQGSINLHLPNVDVRLVDGKVIIAPQATSASRDLVAEMMVMAGRTMAQFTNDNLI
PVPYALQDKGDFDEEFLAKKDALTLSESFLAIKNFKRSAISVKPLLHYGLGLPYYLRVTS
PMRRYYDLLAHQQIINFINDKPMLEVKRVKEIIGSVNMALADVGRVDRFSKDHFKCVFLM
QNPKWLGTGIVVDTRGDKALFMIPELGMMTQIKFKNLPKLDEEMQLQVTRVNLVDKSANF
KVT
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgaagaattctctggttgcctacaagggcaaacctgcacgcattaccgatattgttgaa
agcaagttcgccttagaatttgccgatggtgcaacgctaaaagtacgcgagaaagatttt
cgatttattcatccggaatttaccacagtcaatgaagactactcaaaagccgactttgaa
atgttggcagaatttcaagaagaaaccttaaccctgcaagaaattaccgaatggctgttt
gacgaatatacggcgcaaaacgcttggtgtgtgtgcctaatggtggaagatgggctgtat
ttttattggcaaaaagaccgtatttttgtgcggccgacttcgcagattgagaatatacaa
gcaaagcgcgatgctgagaaattggcggcacaaagtttgacacattgtgttgagaatttg
tctaataacacctttaatgaggcagatgagccctaccttaaagagattgctagagtagcg
cttaatcagtcgaaaacggcaaaaattttagcgcaagtcggtgtggaaaatacacccgat
gcagcgtatcaattgttacttaaaattaaatattttgcagtagattttaatccatatcct
gcccgttttgccattcctaaagacgaagaaattgcagtgaaagtgccagaaatagagcgc
gttgatttaacgcatttgacttgttacgccattgataatgacggctcaaatgatgccgat
gatgccattagtattgatggcaatacgctgtgggtacatgtggcagatgtggcaaatatt
gtaccatctgggtcggatttggatgtttatgcacaggagcgaggctctaatttttatttg
ccgaatgaaattattcatatgttgccagtttcagtgacggaggcatcagccttaggggca
acggaaaaatcagacgctttgtcatttagttttgaatttgacggtgagaacattaataat
attaaagttatgcaaagtgtggtttgtgtgactaacaccacttatgaagcggtagatgag
atgttgatggcgaattctaatgaggatttggcacgcatcaaagcgattggcgaggcgcat
aaaaaatatcgagatgcccaagggtctattaacctgcatttgccaaatgttgatgtgcgc
ttggttgatggaaaagtcattattgcacctcaagcgaccagtgccagtcgagatttagtg
gcagaaatgatggtgatggcagggcgtacaatggcacaatttacgaatgataatctaatt
cctgtgccttatgctttgcaggataaaggagattttgacgaagaatttttggcaaaaaaa
gacgcattaactctgagcgaatcttttttagcgattaagaattttaagcgctctgcaatt
tcagttaaaccgttattacattatggtttaggactgccttattatttgcgcgtaaccagt
ccgatgcgtcgctattatgatttattggcacaccagcaaattattaatttcatcaatgat
aaaccaatgttggaagtgaaacgcgtgaaagaaattatcggctcagttaatatggcgttg
gcagatgtcggcagggttgaccgttttagcaaagaccattttaaatgcgtctttttaatg
caaaatccaaagtggttgggtacgggcatcgttgttgatactcgtggcgataaggcgtta
tttatgattcctgaattagggatgatgacgcagattaaatttaaaaatctgccaaaatta
gatgaagaaatgcaacttcaggtgacgcgtgttaatttggttgataaatcagcgaatttc
aaggtaacttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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