KEGG   Erwinia billingiae: EbC_04520
Entry
EbC_04520         CDS       T01270                                 
Symbol
hfQ
Name
(GenBank) Host factor-I protein
  KO
K03666  host factor-I protein
Organism
ebi  Erwinia billingiae
Pathway
ebi02024  Quorum sensing
ebi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ebi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EbC_04520 (hfQ)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EbC_04520 (hfQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ebi03019]
    EbC_04520 (hfQ)
   03036 Chromosome and associated proteins [BR:ebi03036]
    EbC_04520 (hfQ)
Messenger RNA biogenesis [BR:ebi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     EbC_04520 (hfQ)
Chromosome and associated proteins [BR:ebi03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    EbC_04520 (hfQ)
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: CAX57983
UniProt: D8MM99
Position
540494..540802
AA seq 102 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNAGGGSSNYHHGSNQGASTQPQQESDDTE
NT seq 309 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatcattgcaagatccgttcttgaacgcgctgcgtcgtgaacgtgtt
ccggtttcgatttatttggtgaatggtatcaaactgcagggtcagatcgagtcgtttgat
caatttgtaattctattgaaaaacacagttagccagatggtgtacaagcacgctatctcg
actgttgttccgtcccgtccggtctcccaccacagcaacaatgcgggtggcggaagcagc
aactatcatcatggcagtaaccagggggcgtctactcagcctcagcaagagagtgacgac
acagagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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