KEGG   Erwinia billingiae: EbC_13610
Entry
EbC_13610         CDS       T01270                                 
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
ebi  Erwinia billingiae
Pathway
ebi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ebi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EbC_13610 (rhlE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ebi03019]
    EbC_13610 (rhlE)
Enzymes [BR:ebi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     EbC_13610 (rhlE)
Messenger RNA biogenesis [BR:ebi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     EbC_13610 (rhlE)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UvrD-helicase ERCC3_RAD25_C AAA_22
Other DBs
NCBI-ProteinID: CAX58892
UniProt: D8MPY5
Position
1537384..1538826
AA seq 480 aa
MSFDSLGLNADILRAVAEQGYDEPTPIQRQAIPVVLAGRDLMASAQTGTGKTAGFTLPVL
QLLSSHNPHPKGRRPVRALILTPTRELAAQIGENVQDYSKYLDLRSLVVFGGVSINPQMM
KLRSGVDVLVATPGRLLDLEHQNALDLSKVEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDEIKGLAEKLLHNPEEVSVARRNTASEQITQHVHMVDKKRKRELLSFLI
GRDNWQQVLVFTRTKHGANHLAEQLNKDGITSAAIHGNKSQGARTRALSDFKEGKIRVLV
ATDIAARGIDISELPHVVNFELPNVPEDYVHRIGRTGRAAATGEALSLVCVDELKLLRDI
ERVLKREIPRMAIEGYEPDPSIKAEPILNGRQQQRGGAGGGGGGRGRGAPGGGGNRSGQG
GRGNGGGNGGERSQSATGERSQGNGQRRPAAAGSGSARTEGSSNGAPRTNKTRQRRSNPA
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgtcatttgattctctcggcctgaatgccgatattttgcgtgctgttgcagaacagggt
tacgacgagcctacgccgatccagcgtcaggcaatcccggtagtgttggcaggtcgcgac
ctgatggccagcgcccagaccggtaccggtaaaaccgcgggctttacgctgccggtttta
cagctgctgagcagccacaacccgcatccaaaaggtcgtcgcccggttcgtgcgctgatc
ttaaccccaacccgtgagcttgcggctcagatcggggaaaacgtccaggattactctaag
tacctggatctgcgttcgctggtggtcttcggcggcgtgagcatcaacccgcagatgatg
aaactgcgcagcggcgttgacgtgctggtggcgacacctggccgtctgctggacctggaa
catcagaacgcactggacctctctaaagttgagatcctggtgctggatgaagccgaccgt
atgctggatatgggcttcattcacgatatccgtcgcgtgctggccaaactgcctgccaag
cgtcagaacctgctgttctccgccaccttctctgacgagatcaaaggcctggccgagaag
ctgctgcacaatccagaagaagtgtctgtggcgcgccgcaacactgcttccgagcagatc
actcagcacgttcacatggttgataagaagcgtaagcgtgaactgctgtcgttcctgatt
ggccgtgataactggcagcaggtgctggtcttcacccgtaccaagcacggtgctaaccac
cttgctgagcagctgaacaaagatggcattacgtctgcggccatccacggcaacaagagc
cagggtgcccgtacgcgcgcgctgagcgactttaaagaaggcaaaatccgtgtgctggtg
gcgaccgatatcgccgctcgcggcatcgatatctccgagttgccacacgtggtgaacttt
gagctgccaaacgtaccggaagactacgtgcaccgtattggccgtaccggccgtgcggca
gccaccggtgaagcgttgtctctggtctgtgtcgatgagctgaaactgctgcgtgatatc
gagcgcgtgctgaagcgtgaaatcccacgtatggcgattgaaggctacgagccggatccg
tcgatcaaagctgagccgatccttaacggtcgtcagcagcagcgtggcggtgcaggtggc
ggcggcggtggtcgcggtcgcggtgcgccaggcggcggcggaaatcgcagcggtcagggc
ggtcggggtaacggcggcggcaacggcggcgagcgcagccagtctgccaccggcgaacgt
agccagggtaacggtcagcgtcgtccggccgctgcaggttcgggttctgcccgcactgaa
ggcagcagcaacggggcaccacgtaccaacaaaacccgtcagcgccgctctaacccagcc
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system