KEGG   Equus caballus (horse): 100061385
Entry
100061385         CDS       T01058                                 
Symbol
SORT1
Name
(RefSeq) sortilin isoform X3
  KO
K12388  sortilin
Organism
ecb  Equus caballus (horse)
Pathway
ecb04142  Lysosome
ecb04722  Neurotrophin signaling pathway
ecb04979  Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    100061385 (SORT1)
 09150 Organismal Systems
  09154 Digestive system
   04979 Cholesterol metabolism
    100061385 (SORT1)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    100061385 (SORT1)
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR_6 BNR
Other DBs
NCBI-GeneID: 100061385
NCBI-ProteinID: XP_014595594
Ensembl: ENSECAG00000015853
VGNC: 23453
Position
5:55290979..55354239
AA seq 731 aa
MAFVFHVFDDLSGSVSLSWVGDSTGIILVLTTFHIPLAFGQSKLYRSEDYGKNFKDITNL
INNTFIRTEFGMAIGPENSGKVILTAEVSGGSHGGRIFRSSDFAKNFVQTNLPFHPLTQM
MYSPQNSDHLLALSTDNGLWVSKNFGGKWEEIHKAVCLAKWGSENTIFFTTHVNGSCKAD
LGALELWRTSDFGKSFKTIGVKIYSFGLGGRFLFASVMADKDTTRRIHVSTDQGDTWSMA
QLPSVGQEQFYSILAANDDMVFMHVDEPGDTGFGTIFTSDDRGIVYSKSLDRHLYTTTGG
ETDFTNVTSLRGVYITSVLSEDNSVQTMITFDQGGRWKHLRKPENSECDATAKNKKECSL
HIHASYSISQKLNVPMAPLSEPNAIGIVIAHGSVGDAISVMIPDVYISDDGGYSWARMLE
GPHYYTILDSGGIIVAIEHSSHPINVIKFSTDEGQCWQTYMFTREPIYFTGLASEPGARS
MNISIWGFTESFLTRQWVSYTIDFKDILERSCEEKDYTIWLAHSTDPGDYGNGCILGYKE
QYLRLRKSSVCQNGRDYVVTKQPSVCACSLEDFLCDFGYFRPENDSNCVEQPELKGHDLE
FCLYGRKEHLTTNGYRKIPGDKCQGGVNPVREVKDLKKKCTSNFLSPEKQNSKSNSVPII
LATVGLMLVTVVAGVLIVKKYVCGGRFLVHRYSVLQQHAEANGVDGVDALDTAPHTNKSG
YHDDSDEDLLE
NT seq 2196 nt   +upstreamnt  +downstreamnt
atggcattcgtttttcatgtgttcgatgatctcagtggctcagtatctttgtcttgggtt
ggagatagcactgggatcattctagtcttgactaccttccatataccactggcttttgga
cagtccaagctatatcgaagtgaggactatggaaagaactttaaggatattacaaatctc
atcaataacaccttcattcggactgaatttggcatggccattggtcctgagaactctgga
aaggtgattttaacagcagaggtgtctggaggaagccatggaggaagaatcttcagatcc
tcagattttgcaaagaactttgttcagaccaatctccctttccaccccctcacccagatg
atgtacagccctcagaactcggatcatcttctcgccctcagcactgacaatggcctgtgg
gtgtccaagaattttgggggaaaatgggaagaaatccacaaagcagtgtgtttggccaaa
tggggatcagagaacaccatcttctttaccacccatgtgaacggctcctgcaaagctgac
cttggggccctggaattatggagaacttcagactttgggaaaagcttcaaaaccattggt
gtgaaaatctactcgtttggtcttgggggacgtttcctttttgcctctgtgatggctgat
aaggatacaacaagaaggattcatgtgtcaacagatcaaggggacacatggagcatggcc
cagctcccctctgtggggcaggaacaattctattctattctagcagccaatgatgacatg
gtgttcatgcatgtagatgagcctggagataccggatttggcacaatctttacctcagac
gatcgaggcattgtatattccaagtccttggaccgacatctctacaccaccacgggtggt
gagacggactttaccaatgtgacctccctccgcggggtctatataacaagtgtgctctct
gaagataattctgtccagactatgatcacttttgaccaaggaggaaggtggaagcacctg
aggaagcctgaaaacagtgaatgtgatgctacagccaaaaacaagaaggagtgcagcctt
catattcacgcttcctacagcatctcccagaaactaaatgttccaatggcccccctctca
gagcctaatgccatcggcatagtcatcgcccacgggagcgtgggggatgccatctcagtg
atgatcccagatgtgtacatctcagatgatgggggttactcctgggcgaggatgctggaa
ggaccccactattacaccatcctggattccggaggcatcatcgtggccattgagcacagc
agccatcctatcaatgtgattaagttttccacagatgaaggtcagtgctggcaaacctac
atgttcaccagggagcccatctactttactggcctagcttcagagcctggcgccaggtcc
atgaacatcagcatttggggtttcacggaatctttcctgactcgccagtgggtctcctac
accattgattttaaagatatccttgaaaggagctgtgaagagaaggactataccatatgg
ctggctcactccacagaccctggagattatggaaatggctgcattctaggctataaagaa
cagtatctccggctgcgcaagtcatccgtctgtcagaacggtcgggactacgtagtgacc
aagcagccctccgtctgtgcctgctccctggaggacttcctctgtgattttggctacttc
cgtccagaaaatgactccaactgtgtggaacagccagaactgaagggccacgacctggag
ttttgtctgtatggaagaaaagagcacctgacaaccaacgggtaccggaaaattccagga
gataaatgccaaggtggagtgaatccagttcgagaagtaaaagacttgaaaaagaaatgc
acaagcaactttttgagtccagaaaagcagaattccaagtcaaattctgttccaattatc
ctggccactgtgggattgatgctggtcacagtcgtagcaggagtgctcattgtgaagaaa
tacgtctgtgggggaaggttcctggtgcatcgatactcagtgctacagcagcacgcagag
gccaacggtgtggatggagtggatgctttggatacagccccccacactaataaaagtggt
tatcatgatgactcagatgaggacctcctggagtag

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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