KEGG   Escherichia coli O157 H7 EDL933 (EHEC): Z5075
Entry
Z5075             CDS       T00044                                 
Symbol
rpoZ
Name
(GenBank) RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ece  Escherichia coli O157:H7 EDL933 (EHEC)
Pathway
ece03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ece00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Z5075 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ece03021]
    Z5075 (rpoZ)
   03400 DNA repair and recombination proteins [BR:ece03400]
    Z5075 (rpoZ)
Enzymes [BR:ece01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Z5075 (rpoZ)
Transcription machinery [BR:ece03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Z5075 (rpoZ)
DNA repair and recombination proteins [BR:ece03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Z5075 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AAG58793
UniProt: P0A802
Position
4634951..4635226
AA seq 91 aa
MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLIN
NQILDVRERQEQQEQEAAELQAVTAIAEGRR
NT seq 276 nt   +upstreamnt  +downstreamnt
atggcacgcgtaactgttcaggacgctgtagagaaaattggtaaccgttttgacctggta
ctggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccg
gaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaac
aaccagatcctcgacgttcgcgaacgccaggaacagcaagagcaggaagccgctgaatta
caagccgttaccgctattgctgaaggtcgtcgttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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