KEGG   Escherichia coli K-12 W3110: JW2725
Entry
JW2725            CDS       T00068                                 
Symbol
ygbT
Name
(GenBank) conserved hypothetical protein
  KO
K15342  CRISP-associated protein Cas1
Organism
ecj  Escherichia coli K-12 W3110
Brite
KEGG Orthology (KO) [BR:ecj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecj03400]
    JW2725 (ygbT)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ecj02048]
    JW2725 (ygbT)
DNA repair and recombination proteins [BR:ecj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     JW2725 (ygbT)
Prokaryotic defense system [BR:ecj02048]
 CRISPR-Cas system
  Universal Cas proteins
   JW2725 (ygbT)
SSDB
Motif
Pfam: Cas_Cas1 MgtC
Other DBs
NCBI-ProteinID: BAE76832
UniProt: Q46896
Structure
Position
complement(2877511..2878428)
AA seq 305 aa
MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRV
SHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMF
ELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTINQCI
SAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNP
GEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDA
GHRSS
NT seq 918 nt   +upstreamnt  +downstreamnt
atgacctggcttccccttaatcccattccactcaaagatcgcgtctccatgatctttctg
caatatgggcagatcgatgtaatagatggcgcgtttgtacttatcgacaagacagggatc
cgcactcatattcctgttggctcggttgcctgcatcatgctggaacctggtacacgggtt
tcgcatgcagctgtacgcctggctgcgcaagttggaacattgttggtatgggtgggggaa
gcgggcgttcgtgtttatgcttctggtcagcctggaggtgcgcgttcagataagctgctc
tatcaggcaaaacttgctctggatgaagatttgcgtctgaaggtcgtacgtaaaatgttt
gaacttcggtttggagaacctgcgcctgcccggcgctccgtagagcaactcagaggtata
gaaggcagtcgcgtgcgggcaacctacgcacttctggcgaagcaatacggcgtgacatgg
aatggacgtcgctacgatccgaaagactgggaaaagggcgatacgatcaaccaatgcatt
agcgctgcaacttcctgtttatacggcgtaactgaagcggcgatacttgcagctggttat
gcaccagctattgggtttgtgcatacaggaaagcctctttcctttgtttacgatattgca
gacatcattaaatttgacactgttgtaccgaaagcttttgagatagcgcgtcgtaaccct
ggtgagccggaccgggaagtccgtttggcgtgcagggatatttttcgcagtagtaaaaca
ttagccaaattgattccgcttatagaggacgtgcttgccgctggagaaatacaaccgccg
gccccacctgaagatgcacagcctgttgccattccgcttcctgtttcactgggagatgca
ggccatcggagtagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (15)   
   PDB (15)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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