KEGG   Escherichia coli 55989 (EAEC): EC55989_4817
Entry
EC55989_4817      CDS       T00826                                 
Symbol
holC
Name
(GenBank) DNA polymerase III, chi subunit
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
eck  Escherichia coli 55989 (EAEC)
Pathway
eck03030  DNA replication
eck03430  Mismatch repair
eck03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:eck00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EC55989_4817 (holC)
   03430 Mismatch repair
    EC55989_4817 (holC)
   03440 Homologous recombination
    EC55989_4817 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:eck03032]
    EC55989_4817 (holC)
   03400 DNA repair and recombination proteins [BR:eck03400]
    EC55989_4817 (holC)
Enzymes [BR:eck01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EC55989_4817 (holC)
DNA replication proteins [BR:eck03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EC55989_4817 (holC)
DNA repair and recombination proteins [BR:eck03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EC55989_4817 (holC)
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: CAV01801
UniProt: B7LCW3
Position
complement(4931680..4932123)
AA seq 147 aa
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP
AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYE
DSLKQLARERYKAYRVAGFNLNTATWK
NT seq 444 nt   +upstreamnt  +downstreamnt
atgaaaaacgcgacgttctaccttctggacaatgacaccaccgtcgatggcttaagcgcc
gttgagcagctggtgtgtgaaattgccgcagaacgttggcgcagtggtaagcgcgtgctc
atcgcctgtgaagatgaaaagcaggcttaccggctggatgaagccctgtgggcgcgtccg
gcagaaagctttgttccgcataatttagcgggagaaggaccgcgcggcggtgcgccggtg
gagatcgcctggccgcaaaaacgcagcagcagcccgcgcgatatattgattagtctgcga
acaagctttgcagattttgccaccgctttcacagaagtggtagacttcgttccttatgaa
gattctctgaaacaactggcgcgcgaacgctataaagcctaccgcgtggctggtttcaac
ctgaatacggcaacctggaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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