KEGG   Enterobacter roggenkampii 35734: LI67_001390
Entry
LI67_001390       CDS       T04878                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ecls  Enterobacter roggenkampii 35734
Pathway
ecls03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ecls00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LI67_001390 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecls03021]
    LI67_001390 (rpoZ)
   03400 DNA repair and recombination proteins [BR:ecls03400]
    LI67_001390 (rpoZ)
Enzymes [BR:ecls01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     LI67_001390 (rpoZ)
Transcription machinery [BR:ecls03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     LI67_001390 (rpoZ)
DNA repair and recombination proteins [BR:ecls03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      LI67_001390 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AKZ71415
UniProt: A0A0W2I848
Position
1:complement(108217..108492)
AA seq 91 aa
MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLIN
NQILDVRERQEQQEQEAAELQAVTAIAEGRR
NT seq 276 nt   +upstreamnt  +downstreamnt
atggcacgcgtaactgttcaggacgctgtagagaaaattggtaaccgttttgacctggtg
ctggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggtaaagatccgctggtaccg
gaagaaaacgataaaaccaccgttattgcacttcgcgaaatcgaagaaggtctgatcaac
aaccagatcctcgacgtgcgtgagcgccaggagcagcaagagcaggaagccgcagaactg
caggccgtaaccgctattgctgaaggtcgtcgttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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