KEGG   Enterobacter hormaechei subsp. hormaechei: LI64_00885
Entry
LI64_00885        CDS       T03709                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
eclz  Enterobacter hormaechei subsp. hormaechei
Pathway
eclz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:eclz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LI64_00885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eclz03019]
    LI64_00885
Enzymes [BR:eclz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     LI64_00885
Messenger RNA biogenesis [BR:eclz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     LI64_00885
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CCDC138_C ERCC3_RAD25_C AAA_22
Other DBs
NCBI-ProteinID: AJB69196
Position
complement(180763..182031)
AA seq 422 aa
MSKTHLTEQKFSDFALHPKVIEALETKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPAANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPQSKYNPDALLSELPPPKRLTRPRSGNGPRRSGGAPRNRRR
SG
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccaaaggtg
atcgaagcccttgaaactaaggggtttcataactgcacgcccattcaggctctcgccctg
ccgctgacgctggccggtcgcgatgttgcagggcaggcgcaaaccggtactggcaaaacg
atggcgtttttaacgtcaacgtttcattatttactttctcacccagcgattgcagaccgc
aaagttaaccagccgcgcgcgctaattatggccccgacgcgagaactggcggtacagatc
cacgcagacgctgagcccctggcgcaggccaccggcctgaaacttggcctggcctatggc
ggcgacggctacgataaacagctgaaagtgctggaaagcggcgtggatatcctgattggg
accaccggccgtcttatcgactacgccaaacagaaccatatcaacctcggcgcaatccag
gtcgtggtgctggatgaagcagaccgcatgtacgatctgggcttcattaaagacatccgc
tggctgttccgccgtatgcctgcggcaaaccagcgtctgaatatgctgttctccgcaacc
ctttcttatcgcgttcgcgaactggcgttcgaacagatgaacaacgccgaatatgtggaa
gtggaaccggagcagaaaaccgggcaccgcattaaagaagagcttttctatccttcaaat
gaagagaaaatgcgcctgctgcaaaccctgatcgaagaggagtggccggatcgcgccatc
atcttcgcgaacaccaaacaccgctgtgaagatatctggggtcacctggcggcagatggt
caccgtgtgggcctgctgaccggcgacgtggcgcagaaaaaacgcctgcgtattctcgac
gaatttactcgtggcgacctcgatattctggtcgcgaccgacgtggcggcccgtggcctg
catattccagccgtgacgcacgtctttaactatgacctgccagatgactgtgaagactat
gtacaccgtatcggtcgtaccggtcgtgctggcgcaagcggtcactccatcagccttgcg
tgtgaagagtatgcgctgaaccttccggctattgagacctacatcggtcactctatccca
cagagcaaatacaatccggacgcgctgttaagcgagctgccgccacctaagcgcctcacc
cgtccacgctccggcaatggcccgcgtcgttcaggcggtgcaccgcgtaatcgtcgtcgt
tcaggttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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