KEGG   Escherichia coli K-12 MG1655: b1916
Entry
b1916             CDS       T00007                                 
Symbol
sdiA
Name
(RefSeq) DNA-binding transcriptional dual regulator SdiA
  KO
K07782  LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
eco  Escherichia coli K-12 MG1655
Pathway
eco02020  Two-component system
eco02024  Quorum sensing
eco02026  Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:eco00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    b1916 (sdiA)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    b1916 (sdiA)
   02026 Biofilm formation - Escherichia coli
    b1916 (sdiA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:eco03000]
    b1916 (sdiA)
Transcription factors [BR:eco03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    b1916 (sdiA)
SSDB
Motif
Pfam: Autoind_bind GerE Sigma70_r4_2 HTH_20 Sigma70_r4 HTH_23 HTH_10 HTH_38
Other DBs
NCBI-GeneID: 946421
NCBI-ProteinID: NP_416426
Pasteur: sdiA
RegulonDB: ECK120000924
ECOCYC: EG10935
ASAP: ABE-0006381
UniProt: P07026
Structure
Position
complement(1996110..1996832)
AA seq 240 aa
MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY
TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT
QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF
SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI
NT seq 723 nt   +upstreamnt  +downstreamnt
atgcaggataaggattttttcagctggcgtcgcacgatgctgttgcgttttcagaggatg
gagaccgcagaagaggtctaccatgaaattgagcttcaggctcagcagctggagtacgat
tactattcgttatgtgtccgccacccggtaccattcactcgacctaaagtggctttttac
accaattaccctgaggcgtgggttagttattatcaggcaaaaaactttctcgcaattgat
ccggtgctgaaccctgaaaactttagtcagggccatttaatgtggaatgatgacttattc
agcgaagcacagccgttatgggaagccgcgcgcgcacatggtttacgccgcggtgtcact
cagtatttaatgctgccaaaccgggcgctgggctttttgtccttttcccgttgcagcgcg
cgcgaaatacccattcttagtgatgaactgcaattaaaaatgcagttactggtgcgcgaa
agtctgatggctctgatgcgtttaaatgatgaaatagtgatgacgccagagatgaatttc
agcaagcgcgaaaaagaaattctgaggtggacggcggaagggaaaacatcagcagagata
gcgatgattttgtcaatctctgagaatacggtcaatttccaccagaaaaacatgcagaaa
aaaattaatgcaccaaataagacccaggttgcctgttacgcggccgctactggcttaatt
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ASAP (1)   
   ECOCYC (1)   
   OC (1)   
   PASTEUR (1)   
   REGULONDB (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (8)   
   Pfam (8)   
All databases (32)   

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