KEGG   Escherichia coli K-12 MG1655: b4350
Entry
b4350             CDS       T00007                                 
Symbol
hsdR
Name
(RefSeq) type I restriction enzyme EcoKI endonuclease component
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
eco  Escherichia coli K-12 MG1655
Brite
KEGG Orthology (KO) [BR:eco00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:eco02048]
    b4350 (hsdR)
Enzymes [BR:eco01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     b4350 (hsdR)
Prokaryotic defense system [BR:eco02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   b4350 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C HSDR_N DUF4145 PhoH UvrD-helicase Flavi_DEAD SLFN-g3_helicase MRP-S26
Other DBs
NCBI-GeneID: 948878
NCBI-ProteinID: NP_418770
RegulonDB: ECK120000452
ECOCYC: EG10459
ASAP: ABE-0014264
UniProt: P08956
Position
complement(4583249..4586761)
AA seq 1170 aa
MMNKSNFEFLKGVNDFTYAIACAAENNYPDDPNTTLIKMRMFGEATAKHLGLLLNIPPCE
NQHDLLRELGKIAFVDDNILSVFHKLRRIGNQAVHEYHNDLNDAQMCLRLGFRLAVWYYR
LVTKDYDFPVPVFVLPERGENLYHQEVLTLKQQLEQQVREKAQTQAEVEAQQQKLVALNG
YIAILEGKQQETEAQTQARLAALEAQLAEKNAELAKQTEQERKAYHKEITDQAIKRTLNL
SEEESRFLIDAQLRKAGWQADSKTLRFSKGARPEPGVNKAIAEWPTGKDETGNQGFADYV
LFVGLKPIAVVEAKRNNIDVPARLNESYRYSKCFDNGFLRETLLEHYSPDEVHEAVPEYE
TSWQDTSGKQRFKIPFCYSTNGREYRATMKTKSGIWYRDVRDTRNMSKALPEWHRPEELL
EMLGSEPQKQNQWFADNPGMSELGLRYYQEDAVRAVEKAIVKGQQEILLAMATGTGKTRT
AIAMMFRLIQSQRFKRILFLVDRRSLGEQALGAFEDTRINGDTFNSIFDIKGLTDKFPED
STKIHVATVQSLVKRTLQSDEPMPVARYDCIVVDEAHRGYILDKEQTEGELQFRSQLDYV
SAYRRILDHFDAVKIALTATPALHTVQIFGEPVYRYTYRTAVIDGFLIDQDPPIQIITRN
AQEGVYLSKGEQVERISPQGEVINDTLEDDQDFEVADFNRGLVIPAFNRAVCNELTNYLD
PTGSQKTLVFCVTNAHADMVVEELRAAFKKKYPQLEHDAIIKITGDADKDARKVQTMITR
FNKERLPNIVVTVDLLTTGVDIPSICNIVFLRKVRSRILYEQMKGRATRLCPEVNKTSFK
IFDCVDIYSTLESVDTMRPVVVRPKVELQTLVNEITDSETYKITEADGRSFAEHSHEQLV
AKLQRIIGLATFNRDRSETIDKQVRRLDELCQDAAGVNFNGFASRLREKGPHWSAEVFNK
LPGFIARLEKLKTDINNLNDAPIFLDIDDEVVSVKSLYGDYDTPQDFLEAFDSLVQRSPN
AQPALQAVINRPRDLTRKGLVELQEWFDRQHFEESSLRKAWKETRNEDIAARLIGHIRRA
AVGDALKPFEERVDHALTRIKGENDWSSEQLSWLDRLAQALKEKVVLDDDVFKTGNFHRR
GGKAMLQRTFDDNLDTLLGKFSDYIWDELA
NT seq 3513 nt   +upstreamnt  +downstreamnt
atgatgaataaatccaattttgaattcctgaagggcgtcaacgacttcacttatgccatc
gcctgtgcggcggaaaataactacccggatgatcccaacacgacgctgattaaaatgcgt
atgtttggcgaagccacagcgaaacatcttggtctgttactcaacatccccccttgtgag
aatcaacacgatctcctgcgtgaactcggcaaaatcgcctttgttgatgacaacatcctc
tctgtatttcacaaattacgccgcattggtaaccaggcggtgcacgaatatcataacgat
ctcaacgatgcccagatgtgcctgcgactcgggttccgcctggctgtctggtactaccgt
ctggtcactaaagattatgacttcccggtgccggtgtttgtgttgccggaacgtggtgaa
aacctctatcaccaggaagtgctgacgctaaaacaacagcttgaacagcaggtgcgagaa
aaagcgcagactcaggcagaagtcgaagcgcaacagcagaagctggttgccctgaacggc
tatatcgccattctggaaggcaaacagcaggaaaccgaagcgcaaacccaggctcgcctt
gcggcactggaagcacagctcgccgagaagaacgcggaactggcaaaacagaccgaacag
gaacgtaaggcttaccacaaagaaattaccgatcaggccatcaagcgcacactcaacctt
agcgaagaagagagtcgcttcctgattgatgcgcaactgcgtaaagcaggctggcaggcc
gacagcaaaaccctgcgcttctccaaaggcgcacgtccggaacccggcgtcaataaagcc
attgccgaatggccgaccggaaaagatgaaacgggtaatcagggctttgcggattatgtg
ctgtttgtcggcctcaaacccatcgcggtggtagaggcgaaacgtaacaatatcgacgtt
cccgccaggctcaatgagtcgtatcgctacagtaaatgtttcgataatggcttcctgcgg
gaaaccttgcttgagcactactcaccggatgaagtgcatgaagcagtgccagagtatgaa
accagctggcaggacaccagcggcaaacaacggtttaaaatccccttctgctactcgacc
aacgggcgcgaataccgcgcaacaatgaagaccaaaagcggcatctggtatcgcgacgtg
cgtgatacccgcaatatgtcgaaagccttacccgagtggcaccgcccggaagagctgctg
gaaatgctcggcagcgaaccgcaaaaacagaatcagtggtttgccgataaccctggcatg
agcgagctgggcctgcgttattatcaggaagatgccgtccgcgcggttgaaaaggcaatc
gtcaaggggcaacaagagatcctgctggcgatggcgaccggtaccggtaaaacccgtacg
gcaatcgccatgatgttccgcctgatccagtcccagcgttttaaacgcattctcttcctt
gtcgaccgccgttctcttggcgaacaggcgctgggcgcgtttgaagatacgcgtattaac
ggcgacaccttcaacagcattttcgacattaaagggctgacggataaattcccggaagac
agcaccaaaattcacgttgccaccgtacagtcgctggtgaaacgcaccctgcaatcagat
gaaccgatgccggtggcccgttacgactgtatcgtcgttgacgaagcgcatcgcggctat
attctcgataaagagcagaccgaaggcgaactgcagttccgcagccagctggattacgtc
tctgcctaccgtcgcattctcgatcacttcgatgcggtaaaaatcgctctcaccgccacc
ccggcgctacatactgtgcagattttcggcgagccggtttaccgttatacctaccgtacc
gcggttatcgacggttttctgatcgaccaggatccgcctattcagatcatcacccgcaac
gcgcaggagggggtttatctctccaaaggcgagcaggtagagcgcatcagcccgcaggga
gaagtgatcaatgacaccctggaagacgatcaggattttgaagtcgccgactttaaccgt
ggcctggtgatcccggcgtttaaccgcgccgtctgtaacgaactcaccaattatcttgac
ccgaccggatcgcaaaaaacgctggtcttctgcgtcaccaatgcccatgccgatatggtg
gtggaagagctgcgtgccgcgttcaagaaaaagtatccgcaactggagcacgacgcgatc
atcaagatcaccggtgatgccgataaagacgcgcgcaaagtgcagaccatgatcacccgc
ttcaataaagagcggctgcccaatatcgtggtaaccgtcgacctgctgacgaccggcgtc
gatattccgtcgatctgtaatatcgtgttcctgcgtaaagtacgcagccgcattctgtac
gaacagatgaaaggccgcgccacgcgcttatgcccggaggtgaataaaaccagctttaag
atttttgactgtgtcgatatctacagcacgctggagagcgtcgacaccatgcgtccggtg
gtggtgcgcccgaaggtggaactgcaaacgctggtcaatgaaattaccgattcagaaacc
tataaaatcaccgaagcggatggccgcagttttgccgagcacagccatgaacaactggtg
gcgaagctccagcgtatcatcggtctggccacgtttaaccgtgaccgcagcgaaacgata
gataaacaggtgcgtcgtctggatgagctatgccaggacgcggcgggcgtgaactttaac
ggcttcgcctcgcgcctgcgggaaaaagggccgcactggagcgccgaagtctttaacaaa
ctgcctggctttatcgcccgtctggaaaagctgaaaacggacatcaacaacctgaatgat
gcgccgatcttcctcgatatcgacgatgaagtggtgagtgtaaaatcgctgtacggtgat
tacgacacgccgcaggatttcctcgaagcctttgactcgctggtgcaacgttccccgaac
gcgcaaccggcattgcaggcagttattaatcgcccgcgcgatctcacccgtaaagggctg
gtcgagctacaggagtggtttgaccgccagcactttgaggaatcttccctgcgcaaagca
tggaaagagacgcgcaatgaagatatcgccgcccggctgattggtcatattcgccgcgct
gcggtgggcgatgcgctgaaaccgtttgaggaacgtgtcgatcacgcgctgacgcgcatt
aagggcgaaaacgactggagcagcgagcaattaagctggctcgatcgtttagcgcaggcg
ctgaaagagaaagtggtgctcgacgacgatgtcttcaaaaccggcaacttccaccgtcgc
ggcgggaaggcgatgctgcaaagaacctttgacgataatctcgataccctgctgggcaaa
ttcagcgattatatctgggacgagctggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ASAP (1)   
   ECOCYC (1)   
   OC (1)   
   REGULONDB (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (40)   

Download RDF
DBGET integrated database retrieval system