KEGG   Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_0396
Entry
ECRM13516_0396    CDS       T03011                                 
Symbol
ribD
Name
(GenBank) Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh00740  Riboflavin metabolism
ecoh01100  Metabolic pathways
ecoh01110  Biosynthesis of secondary metabolites
ecoh01240  Biosynthesis of cofactors
ecoh02024  Quorum sensing
Module
ecoh_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:ecoh00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    ECRM13516_0396 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ECRM13516_0396 (ribD)
Enzymes [BR:ecoh01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     ECRM13516_0396 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     ECRM13516_0396 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AHG13084
Position
421156..422259
AA seq 367 aa
MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAG
EKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGI
DVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDV
QRLRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPIRIVIDSQNRVTP
EHRIVQQPGETWFARTQEDSREWPETVRTLLIPEHKGHLDLVVLMMQLGKQQINSIWVEA
GPTLAGALLQAGLVDELIVYIAPKLLGSDARGLCTLPGLEKLADAPQFKFKEIRHVGPDV
CLHLVGA
NT seq 1104 nt   +upstreamnt  +downstreamnt
gtgcaggacgagtattacatggcgcgggcgctaaagctggcgcaacgaggacgttttacc
acccaccccaacccgaatgtcgggtgcgtcattgtcaaagatggcgaaattgtcggtgaa
ggttaccaccaacgagcgggtgaaccacatgccgaagtacacgcgttgcgtatggcgggt
gaaaaagccaaaggtgcgaccgcctatgtcacactcgaaccctgtagccatcatggtcgt
acgccaccgtgctgtgacgcactcatcgccgctggcgtagcgcgcgtggtcgctgcgatg
caagatccgaacccgcaggtcgctgggcgtggactttaccgtctgcaacaggctggcatt
gacgtcagccacggcctgatgatgagtgaagccgagcaattgaataaaggctttctcaag
cggatgcgcaccggctttccttatattcagttaaaacttggcgcatcgcttgatggccgc
acggcgatggcgagcggcgaaagccagtggatcacttcgcctcaggcgcggcgcgacgta
caacgactgcgcgcacaaagtcatgccattttaaccagcagcgccacggtgctggcggat
gatccggccttaacggtgcgttggtctgaactggatgaacaaactcaggcgctctatccg
caacaaaatctccgtcagccgatacgtattgtgattgatagccaaaatcgcgtgacgccg
gaacatcgcattgtgcagcagcccggcgaaacctggttcgcgcgtacgcaggaagattct
cgtgagtggccggaaacggtacgtaccttgttgattccagagcataaaggtcatctggat
ctggttgtactaatgatgcaactgggtaaacagcagattaacagcatctgggtggaagcg
gggccaacgctcgctggcgcattgctgcaggcgggtttagtcgatgagctgattgtctat
atcgcacctaaactattaggcagcgacgcccgtggattatgcacactgccagggcttgag
aaattagccgacgccccccaatttaaattcaaagagatacgtcatgtaggcccggatgtt
tgcctgcatttagtgggtgcatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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