KEGG   Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_0969
Entry
ECRM13516_0969    CDS       T03011                                 
Symbol
ompF
Name
(GenBank) Outer membrane protein F precursor
  KO
K09476  outer membrane pore protein F
Organism
ecoh  Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh01501  beta-Lactam resistance
ecoh02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ecoh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ECRM13516_0969 (ompF)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    ECRM13516_0969 (ompF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ecoh02000]
    ECRM13516_0969 (ompF)
   01504 Antimicrobial resistance genes [BR:ecoh01504]
    ECRM13516_0969 (ompF)
Transporters [BR:ecoh02000]
 Other transporters
  Pores ion channels [TC:1]
   ECRM13516_0969 (ompF)
Antimicrobial resistance genes [BR:ecoh01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, repression of porin OmpF [MD:M00746]
    ECRM13516_0969 (ompF)
SSDB
Motif
Pfam: Porin_1 Porin_4
Other DBs
NCBI-ProteinID: AHG13642
Position
complement(1017597..1018685)
AA seq 362 aa
MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDM
TYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGTDAQTGNKTRLAFAGLKYADVGSFDY
GRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYL
GKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQLLGNGKKAEQWATGL
KYDANNIYLAANYGETRNATPITNKFTNISGFANKTQDVLLVAQYQFDFGLRPSIAYTKS
KAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVY
QF
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgatgaagcgcaatattctggcagtgatcgtccctgctctgttagtagcaggtactgca
aacgctgcagaaatctataacaaagatggcaacaaagtagatctgtacggtaaagctgtc
ggtctgcattatttctccaagggtaacggtgaaaacagttacggtggcaatggcgacatg
acctatgcccgtcttggttttaaaggggaaactcaaatcaattccgatctgaccggttat
ggtcagtgggaatataacttccagggtaacaactctgaaggcactgacgctcaaactggt
aacaaaacgcgtctggcattcgcgggtcttaaatacgctgacgttggttctttcgattac
ggccgtaactacggtgtggtttatgatgcactgggttacaccgatatgctgccagaattt
ggtggtgatactgcatacagcgatgacttcttcgttggtcgtgttggcggcgttgctact
tatcgtaactccaacttctttggtctggttgatggcctgaacttcgctgttcagtacctg
ggtaaaaacgagcgtgacactgcacgccgctctaacggcgacggtgttggcggttctatc
agctacgaatacgaaggctttggtatcgttggtgcttatggtgcggctgaccgtaccaac
ctgcaagaagctcaacttcttggcaacggtaaaaaagctgaacagtgggctactggtctg
aagtatgatgcgaacaacatctacctggcagcgaactacggtgaaacgcgtaacgctacg
ccgatcactaataaatttacaaacatcagcggcttcgccaacaaaacgcaagacgttctg
ttagttgcgcaataccagttcgatttcggtctgcgtccgtccatcgcttacaccaaatct
aaagcgaaagacgtagaaggtatcggtgatgttgatctggtgaactactttgaagtgggc
gcaacctactacttcaacaaaaacatgtccacctatgttgactacatcatcaaccagatc
gattctgacaacaaactgggcgtaggttctgacgacaccgttgctgtgggtatcgtttac
cagttctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system