KEGG   Escherichia coli JJ1886: P423_14580
Entry
P423_14580        CDS       T02896                                 
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehdyrogenase
  KO
K00135  succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Organism
ecoj  Escherichia coli JJ1886
Pathway
ecoj00250  Alanine, aspartate and glutamate metabolism
ecoj00310  Lysine degradation
ecoj00350  Tyrosine metabolism
ecoj00650  Butanoate metabolism
ecoj00760  Nicotinate and nicotinamide metabolism
ecoj01100  Metabolic pathways
ecoj01120  Microbial metabolism in diverse environments
Module
ecoj_M00027  GABA (gamma-Aminobutyrate) shunt
ecoj_M00956  Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:ecoj00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    P423_14580 (gabD)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    P423_14580 (gabD)
   00310 Lysine degradation
    P423_14580 (gabD)
   00350 Tyrosine metabolism
    P423_14580 (gabD)
  09108 Metabolism of cofactors and vitamins
   00760 Nicotinate and nicotinamide metabolism
    P423_14580 (gabD)
Enzymes [BR:ecoj01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.16  succinate-semialdehyde dehydrogenase [NAD(P)+]
     P423_14580 (gabD)
    1.2.1.20  glutarate-semialdehyde dehydrogenase
     P423_14580 (gabD)
    1.2.1.79  succinate-semialdehyde dehydrogenase (NADP+)
     P423_14580 (gabD)
SSDB
Motif
Pfam: Aldedh DUF1487
Other DBs
NCBI-ProteinID: AGY85399
Position
2979142..2980590
AA seq 482 aa
MKLNDSNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAASRA
LPAWRALTAKERANILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDS
VYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA
HERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIIGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgaaacttaacgacagtaacttattccgccagcaggcgttgattaacggggaatggctg
gacgccaacaatggcgaggtcatcgacgtcaccaatccggcgaacggcgacaagctgggt
agcgtgccgaaaatgggcgctgatgaaacccgcgccgctatcgacgccgccagccgcgcc
ctgcccgcctggcgtgcgctcactgccaaagaacgcgccaacattctgcgcaactggttc
aatttaatgatggagcatcaggacgatttagcgcgcctgatgaccctcgaacagggcaaa
ccactggctgaagcgaaaggcgaaatcagctacgccgcctcatttattgagtggtttgct
gaagaaggcaaacgtatttatggcgacaccattcccggtcatcaggccgataaacgcctg
attgtgatcaagcagccgattggcgtcaccgcggctatcacgccatggaacttcccggcg
gcgatgattacccgtaaagctggtccggcgctggcggctggctgcaccatggtgctgaag
cccgccagtcagacgccgttctctgcgctggcgctggcagaactggcgattcgcgcgggc
gttccggctggcgtgtttaacgtggtcaccggttcggcgggcgcggtcggtaacgaactg
accagcaacccgctggtgcgcaagctgtcgtttaccggctcgaccgaaattggccgtcag
ttaatggaacagtgcgcgaaagacatcaaaaaagtgtcgctggagctgggcggcaacgca
ccgtttattgtctttgacgatgccgatctcgataaagccgtggaaggcgcgctggcctcg
aaattccgtaacgccgggcaaacctgcgtctgcgccaaccgcctgtatgtgcaggacagc
gtgtatgaccgctttgccgaaaaattgcagcaggcggtgagcaaactgcacatcggcgac
gggctggagaaaggcgtcaccatcgggccgttgatcgatgaaaaagcggtagcaaaagtg
gaagagcatattgctgatgcgctggagaaaggcgcgcgcgtggtttgcggcggtaaagca
catgaacgcggcggtaacttcttccagccgaccattctggtagacgttccggctaacgcc
aaagtgtcgaaagaagagacgtttggccccctcgccccgctgttccgttttaaagatgaa
gccgatgtgattgcgcaagccaatgacaccgaatttggacttgcagcctatttctacgcc
cgtgatttaagccgcgtcttccgcgtgggcgaagcactggagtacggcatcatcggcatc
aacaccggcattatttccaatgaagtggccccgttcggcggcattaaagcctcgggtctg
ggtcgtgaaggttcgaagtatggcatcgaagattacttagaaatcaaatatatgtgcatc
ggtctttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (7)   
   KEGG MODULE (3)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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