KEGG   Encephalitozoon cuniculi: ECU09_1330
Entry
ECU09_1330        CDS       T00105                                 
Name
(RefSeq) uncharacterized protein
  KO
K10755  replication factor C subunit 2/4
Organism
ecu  Encephalitozoon cuniculi
Pathway
ecu03030  DNA replication
ecu03410  Base excision repair
ecu03420  Nucleotide excision repair
ecu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ecu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ECU09_1330
   03410 Base excision repair
    ECU09_1330
   03420 Nucleotide excision repair
    ECU09_1330
   03430 Mismatch repair
    ECU09_1330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ecu03032]
    ECU09_1330
   03036 Chromosome and associated proteins [BR:ecu03036]
    ECU09_1330
   03400 DNA repair and recombination proteins [BR:ecu03400]
    ECU09_1330
DNA replication proteins [BR:ecu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    ECU09_1330
  DNA Replication Termination Factors
   ELG1-RFC complex
    ECU09_1330
Chromosome and associated proteins [BR:ecu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    ECU09_1330
DNA repair and recombination proteins [BR:ecu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     ECU09_1330
  Check point factors
   HRAD17(Rad24)-RFC complex
    ECU09_1330
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 Rep_fac_C nSTAND3 AAA_22 AAA_24 RuvB_N AAA_18 AAA_14 AAA_assoc_2 Viral_helicase1 AAA_11 AAA_16 Rad17 Mg_chelatase AAA_7 AAA_5 DEAD Sigma54_activ_2 AAA_28 bpMoxR NTPase_1 AAA_30 RNA_helicase AAA_2 ABC_tran AAA_19 KTI12 ResIII DNA_pol3_gamma3 T2SSE AAA_3 TIP49 AAA_17 DNA_pol3_delta AAA_33 FtsK_SpoIIIE Thymidylate_kin
Other DBs
NCBI-GeneID: 860470
NCBI-ProteinID: NP_001402385
Position
IX:151011..151940
AA seq 309 aa
MDLLVNKYQPSEIQDIVGNEATMELVSLMIESRDMPHLLFTGPPGTGKTTCAKILARRLL
GNKEGLLELNASDERGIDTVRTTIKSFAQRRVKDCEFKIIILDEADSMTTTAQQAMRRVM
EIHSSECRFILICNVFTKIFEPIQSRCAILRFDRIEQSVILKRLKEISEGEGIRITAEAL
DLVVELSDGDMRQSLNILQACINSPGTVDQDYIIKIIGLPSPKRIEKVLQRLLKREVEEA
LEMFDEIWEEKFDPLDLINSFFRAAKNMESYELLKVIGLANLRISEGVNSRLQFYGMFWD
ILDMGSKRL
NT seq 930 nt   +upstreamnt  +downstreamnt
atggatctgcttgtgaacaagtaccagccaagcgagatccaggacatagtcggaaacgaa
gcaacgatggaactcgtttccttgatgatcgaaagcagagatatgccccacctgctgttc
acggggcctcccgggacaggaaagacaacctgtgcaaaaatacttgcaaggaggctcctg
ggcaacaaggaggggctgctggagctgaatgcgtctgacgaaagagggatagacactgtt
aggaccaccattaaaagctttgcacagagaagagtcaaggactgtgagttcaagatcata
atcctggacgaggccgactcgatgaccactacagcccagcaggcaatgcgaagggtgatg
gagatacacagctcggagtgcaggtttattctgatctgtaatgtgtttacaaagatattt
gagcctatccagagcagatgtgcaatactaaggtttgacaggatagagcagtccgtgatc
ctcaaaagactaaaggaaatcagcgaaggcgaaggcatcaggataaccgccgaggctctt
gatcttgttgtcgagcttagcgatggggacatgagacagtcgctgaacatccttcaagcg
tgcatcaactctcctggcacagtagaccaggactatatcatcaagataataggccttcca
tctccaaagcggatcgaaaaggttctccagaggctcctgaaaagggaagtagaggaggcc
ctggagatgtttgacgagatctgggaggagaaatttgatcctctcgacctcataaactcg
tttttcagggctgcaaagaacatggaaagctacgagttgcttaaggtgattgggctggca
aacctaaggatatctgagggtgtcaactcaaggctgcagttctatggaatgttctgggac
atcctcgacatgggaagtaaaagattgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (38)   
   Pfam (38)   
All databases (69)   

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