KEGG   Escherichia coli O139 H28 E24377A (ETEC): EcE24377A_0147
Entry
EcE24377A_0147    CDS       T00590                                 
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
ecw  Escherichia coli O139:H28 E24377A (ETEC)
Pathway
ecw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ecw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EcE24377A_0147 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecw03019]
    EcE24377A_0147 (pcnB)
Enzymes [BR:ecw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     EcE24377A_0147 (pcnB)
Messenger RNA biogenesis [BR:ecw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     EcE24377A_0147 (pcnB)
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_arg_C PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: ABV21113
UniProt: A7ZHN4
Position
complement(159195..160559)
AA seq 454 aa
MLSREESEAEQAVARPQVTVIPREQHAISRKDISENALKVMYRLNKAGYEAWLVGGGVRD
LLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNV
SDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGV
IRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESL
KLLQAGYGYDTYKLLCEYHLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMR
VNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTR
DIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAP
PDQKGMLNELDEEPSPRRRTRRPRKRAPRREGTA
NT seq 1365 nt   +upstreamnt  +downstreamnt
gtgctaagccgcgaggaaagcgaggctgaacaggcagtcgcccgtccacaggtgacggtg
atcccgcgtgagcagcatgctatttcccgcaaagatatcagtgaaaatgccctgaaggta
atgtacaggctcaataaagcgggatacgaagcctggctggttggcggcggcgtgcgcgac
ctgttactcggcaaaaagccgaaagattttgacgtaaccactaacgccacgcctgagcag
gtgcgcaaactgttccgtaactgccgcctggtgggtcgccgtttccgtctggctcatgtg
atgtttggcccggagattatcgaagttgcgaccttccgtggacaccacgaaggtaacgtc
agcgaccgcacgacctcccaacgcgggcaaaacggcatgttgctgcgcgacaacattttc
ggctccatcgaagaagacgcccagcgccgcgatttcactatcaacagcctctattacagc
gtagcggattttaccgtccgtgattacgttggcggtatgaaggatctgaaggacggcgtt
atccgtctgattggtaacccggaaacgcgctaccgtgaagatccggtacgtatgctgcgc
gcggtacgttttgccgccaaattgggtatgcgcatcagcccggaaaccgcagaaccgatc
cctcgcctcgctaccctgttgaacgatatcccaccggcacgcctgtttgaagaatcgctt
aaactgctacaagcgggctacggttacgatacctataagctgttgtgtgaatatcatctg
ttccagccgctgttcccgaccattacccgctacttcacggaaaatggcgacagcccgatg
gagcggatcattgaacaggtgctgaagaataccgatacgcgtatccataacgatatgcgc
gtgaacccggcgttcctgtttgccgccatgttctggtacccactgctggagacggcacag
aagattgcccaggaaagcggcctgacctatcacgacgctttcgcgctggcgatgaacgac
gtgctggacgaagcctgccgttcactggcaatcccgaaacgtctgacgacgttaacccgc
gatatctggcagttgcagttgcgtatgtcccgtcgtcagggtaaacgcgcatggaaactg
ctggagcatcctaagttccgtgcggcttatgacctgttggccttgcgagctgaagttgaa
cgtaatgctgaactgcagcgtctggtgaaatggtggggtgagttccaggtttccgcacca
ccagatcaaaaagggatgcttaacgagctggatgaagaaccgtcaccgcgtcgtcgtact
cgtcgtccacgcaaacgcgcaccgcgtcgtgagggtaccgcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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