KEGG   Entamoeba dispar: EDI_228230
Entry
EDI_228230        CDS       T01083                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
edi  Entamoeba dispar
Pathway
edi03020  RNA polymerase
edi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:edi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EDI_228230
  09124 Replication and repair
   03420 Nucleotide excision repair
    EDI_228230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:edi03021]
    EDI_228230
   03400 DNA repair and recombination proteins [BR:edi03400]
    EDI_228230
Transcription machinery [BR:edi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     EDI_228230
DNA repair and recombination proteins [BR:edi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EDI_228230
SSDB
Motif
Pfam: zf-Dof zf-ribbon_3 zinc_ribbon_2 DZR
Other DBs
NCBI-GeneID: 5885115
NCBI-ProteinID: XP_001739966
UniProt: B0EPA6
AA seq 137 aa
MAAINAVKPHFCPDCHQIMLPRSCGDDLYFVCRRPNCGHFEKAEDPTSFCVYIKNFSETK
ATTVAADVSKDPTYPKTTKLCPHCGQQHDAVYYYSAHWNYNCSLQINYQCTNCMYSWAEG
GIPFDKKEKREEGSENN
NT seq 414 nt   +upstreamnt  +downstreamnt
atggcagcgattaatgcagttaaacctcatttttgtcccgactgtcatcaaataatgctt
ccaagaagttgtggagacgatttatattttgtgtgcagaagaccaaattgtggacatttt
gaaaaagctgaagacccaacaagtttctgtgtatatatcaaaaactttagtgaaacaaag
gcaacaacagttgccgcagatgtgagtaaagacccaacatatcccaaaacaacaaaactt
tgccctcactgtggccaacaacacgacgctgtgtattattattctgcacattggaattac
aactgttcattacaaattaattatcagtgtactaattgtatgtatagttgggctgaagga
ggaattcctttcgataaaaaggagaagagagaagaaggctcggaaaataattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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