KEGG   Edwardsiella sp. LADL05-105: AAZ33_03560
Entry
AAZ33_03560       CDS       T04005                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
edl  Edwardsiella sp. LADL05-105
Pathway
edl03030  DNA replication
edl03430  Mismatch repair
edl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:edl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AAZ33_03560 (dnaE)
   03430 Mismatch repair
    AAZ33_03560 (dnaE)
   03440 Homologous recombination
    AAZ33_03560 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:edl03032]
    AAZ33_03560 (dnaE)
   03400 DNA repair and recombination proteins [BR:edl03400]
    AAZ33_03560 (dnaE)
Enzymes [BR:edl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AAZ33_03560 (dnaE)
DNA replication proteins [BR:edl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AAZ33_03560 (dnaE)
DNA repair and recombination proteins [BR:edl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AAZ33_03560 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP DNA_pol_IIIA_C HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: AKR76932
Position
793352..796840
AA seq 1162 aa
MAEPRFIHLHVHSDYSMIDGLAKTSPLVKKVAALGMPAFAITDHTNLCGLVKFYGSAHGA
GIKPLVGADVLVRSETMGDELSALTLLACDNEGYQNLTQLISHAYQRGYGAEGPTIDRDW
LIAYRAGLILLSGARHGDVGKLLLRGNQTLVGECVDFYQRHFPDSYFLELVRTGRPDEES
YLHLAVELAQQRDLPLVATNDVRFLEASDFDAHEIRVAIHDGYTLDDPKRPRNYSAQQYM
RSEEEMCELFADLPEALQNSVEIAKRCNVTIRLGQYFLPQFPTGEMSTEDFLVKMAHEGL
EERLTFLFPDEADRARLRPPYDERLEIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYSLKITDLDPLAFDLLFERFLNPERVSMPDFDVDFCMEKRDRVIDHVAD
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDAEGNHPVTQ
FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINARRARQGLEPVDIAAIPLDDQKSFDIL
QRAETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
LSYPDREWQHESLKPVLEPTYGVILYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKPEEM
AKQRSVFEEGARNNGVNGELAMHIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGQYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIIEARNSGEQGYFKDLFDLCARTDTKKLNRRMMEKLIMSGAFDRLGPHRAAL
MSSLSDALKAAEQHARAEAIGQADMFGVLAEEPEQVEQSYGSVPPWPAQMVLDGERETLG
LYLTGHPITQYLKEIERYAGGGRLKDMHPTDRGKMTTAVGLVLGARVMTTKRGNRIGMCT
LDDRSGRLEVMLFTDALEKYQHLLEKDRILIASGQVSFDDFSGGLKMIARELMDISEARE
KYARGLAISLTDRQIDDQLLNRLREALEPHRSGTIPVHLYYQRADARARVRFGAAWRVTP
TDRLLLDLRTLVGCEQVELEFD
NT seq 3489 nt   +upstreamnt  +downstreamnt
atggcggaaccacgttttatacatctgcatgtgcacagtgactactcgatgatcgacggg
ctggcgaagaccagtcccctggtcaagaaggtcgccgcgctggggatgcccgccttcgcg
atcaccgaccataccaacctgtgcgggctggtcaagttttatggcagcgcgcacggcgcc
gggatcaagccgctggtcggggccgatgtcctggtccgcagcgagacgatgggcgatgag
ctgtcggcgctgactcttctggcctgtgataacgagggctaccagaatctgacccagctt
atctcacacgcctaccagcgcggctatggcgcagaggggccgacgatcgatcgcgattgg
ctgatcgcgtaccgcgccgggctgattttgctctccggcgcccgccacggcgacgtgggt
aagctgctgctgcgcggtaatcagacgctggtcggtgagtgcgttgacttctaccaacgg
cactttcctgatagctactttttagagttggtgcgcaccggacgccccgatgaggagagc
tatctgcacctggcggtggagctggcgcagcagcgtgatttgccgctggtggcgaccaac
gacgtccgcttcttggaggcctcggactttgacgcccatgagatccgcgtcgcgatccac
gacggctataccttagacgatcccaagcgcccacgtaactatagcgctcagcaatacatg
cgcagcgaagaggagatgtgcgagctgttcgccgatctgcccgaggcgctgcagaacagc
gtagagattgctaagcgttgtaatgtgaccatccgactcggccagtactttctgccgcag
ttccccaccggggagatgtcgacggaggatttcctggtgaagatggcgcacgaggggctg
gaggagcgtctcacgttcctgttccccgatgaggcggaccgtgcccgactgcgcccgcct
tacgatgagcgtctggagatcgagctgaaggtgatcaaccagatgggcttccccggttac
ttcctgatcgtgatggagtttatccagtggtctaaggataacggggttccggtggggccg
gggcgcggctccggcgccggctcgctggtggcctattcgctgaagattaccgacctcgat
ccgctggccttcgatctgctgttcgaacgttttcttaacccggaacgcgtatccatgccc
gactttgacgtcgacttctgcatggagaagcgcgatcgggtgatcgatcacgtcgccgat
atgtatggccgtgaagcggtatcgcagatcatcaccttcggtaccatggcggccaaggcg
gtgatccgcgacgtgggacgtgtgctgggtcatccctacggcttcgtcgatcgcatctcc
aagctggtgccaccggatcctggcatgaccctggccaaggccttcgaggcggagccgcag
ctgccggagatctacgaggcggatgaagaggtgcgggcgctgatcgacatggcgcgcaag
ctggagggggtcacccgcaacgccggtaagcacgccggtggggtggtgatctcgccgacc
aagatcaccgacttcgcgccgctgtactgcgatgccgaggggaatcacccggtcacccag
ttcgacaagagcgacgtggagtacgccgggctggtgaagtttgacttcctgggcctgcgt
accctgaccatcatcaactgggcgctggagatgatcaacgcccgccgtgcgcgccagggg
ctggagccggtggatatcgccgccattccgctcgacgatcagaagagcttcgatatcctg
cagcgcgcggagaccacggcggtattccagctggaatcgcgcgggatgaaggatctgatc
aagcgtctaaagccggactgcttcgaagatatgatcgcgctggtggcgctgttccgcccc
ggcccgctgcagtcggggatggtcgataactttatcgaccgtaagcacgggcgcgaagag
ctctcctacccggaccgtgagtggcagcatgagagtttgaagccggtgctggagccgacc
tacggcgtgatcctgtatcaggaacaggtgatgcagatagcccaggtgctggccggctac
tcgctgggcggcgccgacctgctgcgccgtgcgatgggtaagaaaaagcccgaggagatg
gccaagcagcgctcggtgtttgaagagggcgccaggaacaacggcgtcaacggcgaactg
gcgatgcacatcttcgacctggtggagaagttcgccggctatggctttaacaagtcgcac
tccgccgcctatgcgctggtctcttaccagacgctgtggctgaaaacccactatccggcc
gagtttatggcggcggtgatgaccgccgatatggataacaccgagaaggtggtcgggctg
gtggatgagtgctggcggatggggctgaagatcctgccgccggacatcaacagcgggcag
tatcacttccacgtcaacgatgagggcgagatcgtctacggtatcggcgccatcaaaggg
gtcggggaagggccaatcgaggcgatcatcgaggcgcgcaacagcggcgaacagggctat
tttaaggatctgtttgatctgtgcgcccgcaccgataccaagaagctgaaccgtcggatg
atggagaagctgatcatgtccggcgccttcgatcgcctggggccgcaccgcgcggcgctg
atgagctcgctgagcgatgcgctgaaggccgccgagcagcacgcccgcgccgaggccatc
ggacaggcggacatgtttggtgtgctggcggaagagccggagcaggtagagcaatcctat
ggcagcgtgccgccctggccagcccagatggtgctggacggcgagcgcgagaccctgggg
ctgtacctgaccggccatccgatcacccagtatctgaaagagatcgaacgctatgccggc
ggtggccgtctgaaggatatgcatccgacggatcgtggtaagatgaccaccgccgtgggg
ctggtgctgggggcccgggtgatgacgaccaagcgcggtaaccgcatcggaatgtgtacc
ctcgacgatcgatccggccgtctggaggtgatgctgttcaccgatgcgctggaaaaatac
cagcatttgctggagaaagaccgtatcctgatcgccagcggacaggtcagctttgatgac
ttcagcggcggccttaaaatgatcgcccgcgagttaatggatatcagcgaagcccgtgaa
aaatatgcacgtggacttgccatctcgctgactgacaggcaaattgatgatcagctttta
aaccgtctccgtgaagcgctggaaccacatcgttcggggacgatcccagtacacctgtat
tatcagcgtgcggatgcgcgggcccgggttcgtttcggtgcagcctggcgcgtgacgccg
acggatcgcctgctgctcgatctgcgcacgctggtgggatgtgaacaggtggaactggaa
tttgactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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