KEGG   Enterococcus faecalis Symbioflor 1: EFS1_0872
Entry
EFS1_0872         CDS       T02399                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
efs  Enterococcus faecalis Symbioflor 1
Pathway
efs03030  DNA replication
efs03430  Mismatch repair
efs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:efs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EFS1_0872 (dnaE)
   03430 Mismatch repair
    EFS1_0872 (dnaE)
   03440 Homologous recombination
    EFS1_0872 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:efs03032]
    EFS1_0872 (dnaE)
   03400 DNA repair and recombination proteins [BR:efs03400]
    EFS1_0872 (dnaE)
Enzymes [BR:efs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EFS1_0872 (dnaE)
DNA replication proteins [BR:efs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EFS1_0872 (dnaE)
DNA repair and recombination proteins [BR:efs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EFS1_0872 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HHH_3 SSB tRNA_anti_2 Ssb-like_OB
Other DBs
NCBI-ProteinID: CCO71950
Position
892755..896084
AA seq 1109 aa
MSFPQLHTVTSYSLLSSTVRIRSYVKQAKALGYQTLAITDINVLHGAVEFYEACQEAGIQ
PIIGLRLEYTPAEKEGHSELLLFAKNLKGYQQLMQLSSSKMTTEGPFYLAEHQSLLSDLF
AVTLSAKGEVAQTFFEDEQQAVHAFQQLASYFDPQSLFVEHSFSMNQQRNPALFSFYQRE
QLPGVALQEVRHLTREEGFAVTVLESIKENNQLNITSQTPEIEGLNYLREAETTMEQMLQ
IAGAEVVQNTIQLAENCRVDIPLHQKLLPHFPVPDNQTAGSYLRTLCLEKLPERVPHLNE
VYQKRLEKELTIIHNMGFDDYFLIVWDVMDFCHNNQIVTGAGRGSAAGSLVSYVLSITDV
DPIKYDLLFERFLNPERYTMPDIDLDIPDNRREEVLAYVSQKYGHYHMAQIATFGTMAAK
MVLRDVARVFGLSQSEANRWSAAVPNKLKITLEEAYQESKRMQELVNFSPNNQLLYKTAV
QLEGLPRHVSTHAAGVVISDENLLNLVPLQLGSNEILLTQFTMNDVEKIGLLKMDFLGLR
NLSIIDDTLTAVKRVYNQTIRLNQIPLDDETTLALFRKGETSGVFQFESAGIRNVLRKLG
PTSIEDIAAVNALYRPGPMQNIDVFIRRKKGLEQISYPEPSLAPILENTYGIIVYQEQIM
QVAAKMAGFSLGQADILRRAISKKKKDVLDEERNHFVNGALQQGYPKETANQVYDYIERF
ANYGFNRSHAFAYSFIGFQMAYLKVHYPSAFYVALLHSVRHNPTKIKEYIGEARKNKQTI
LQPSINQSHYSFYLNQQQQILFGFSSLKGIRRDFIQNILNERRENGPYKTFDEFLLRIDR
KWLKVENIEPLIAIGAFDEIAPNRRQLAVGLESNIQSILLSGGSMDLLETLKPKEEEIAD
YPLEERLEQEEQYLGVYLSGHPTEEFKKTRLAKQTQLVHELVENQPTKLLIYVKNIRTIR
TKKGEQMAFVDGDDTTGSISLTLFPTVFRQLRQSVEKGQVYYVEGKVERSTYNQELQILV
QRIEKAQQVETSISDETCFIRITKDVEQTDVFQKMKEVLSRHAGHIPVIVYFEKTGKKIV
LNEENWVAHTSASQQQLAYVLGEQNVIFK
NT seq 3330 nt   +upstreamnt  +downstreamnt
atgtcatttccacaattacataccgttacttcctattcgcttttatctagtacggttagg
attcgttcctatgtaaaacaagcgaaagcgttaggttatcaaacattagcgattaccgat
atcaatgtcttgcatggggcggttgaattttatgaagcatgccaagaagcgggaattcaa
ccaattatcggtttaagattagaatataccccagcagaaaaagaagggcattccgagttg
cttttatttgctaaaaatttaaaagggtatcagcaattaatgcaactatctagcagtaaa
atgacgacagagggtcccttttacttagcggaacatcaatccttattaagtgatttattt
gccgtgactttgtcagccaaaggagaagtcgcccaaacattttttgaagatgaacaacaa
gcggttcacgctttccaacaacttgcttcatattttgatccccagtcgttatttgttgaa
cattctttttcaatgaatcaacaacgcaatccagcgctcttttctttttaccaacgagaa
caattacctggcgtggctttgcaagaggtacgtcatttaacaagggaagaaggctttgcc
gttactgttcttgagagcatcaaagaaaataatcaattgaatattacaagccaaacaccg
gaaatagaaggtctgaattacttgcgtgaagcagagacgacgatggaacaaatgcttcaa
atagctggtgcagaagtggtccagaatacgattcagctagctgaaaattgccgagttgac
attcctttacatcaaaaattattaccgcattttcctgtgcctgataatcaaacggctggt
tcttatttacgcacattgtgtttagaaaaattaccagaaagagtgcctcatctaaatgaa
gtttaccaaaaacgattagaaaaagagttaaccatcattcacaatatgggctttgatgat
tactttttaatcgtttgggatgtgatggacttctgtcataacaatcaaattgttacaggc
gctggccgaggttcagctgcaggctctttagtgtcctatgtgctatcaattacagatgta
gatccaatcaaatatgatttgctttttgaacgttttttgaatccagaacgctacacgatg
cccgatattgatttagatattcctgataatcggcgggaggaagttttagcttatgtcagt
caaaaatatggtcattatcacatggcgcaaattgccacgtttggtacgatggctgcgaaa
atggttttacgggacgttgcacgtgttttcgggttgtcccagagtgaagcgaatcgttgg
tcggcagctgtccccaacaagctgaaaattacgttagaagaagcgtaccaagagtcgaaa
cggatgcaagaattggtcaatttttcaccaaataatcaattgctctataaaacagctgtt
cagctagaaggattgcctcgccatgtttctacgcacgcagcaggtgtggtaattagtgat
gaaaatcttttgaatttggttccgttacaactaggatcgaatgaaattttattgacccaa
tttactatgaatgatgttgaaaaaattggtcttctgaaaatggatttcttgggcttaaga
aatttatccatcattgatgataccctcacagctgttaaacgcgtctataatcaaaccatt
cgtttgaatcagattccattagatgacgaaacgacgctggctttatttagaaaaggggaa
acaagtggtgtttttcagtttgaatctgctggaattcggaatgtattaagaaaattaggg
ccaactagcattgaagatattgctgctgtcaatgccctgtatcgtcctggtccgatgcaa
aatattgatgttttcatccgccggaaaaaaggcttggaacaaattagttatccagagcct
agtctcgcccccattttggaaaatacgtacggaattattgtttaccaagagcagattatg
caagttgctgcgaaaatggctggcttctctttagggcaagctgacattttacgtcgggcc
attagtaaaaagaaaaaagatgtgctagatgaagaacggaatcattttgttaatggtgcg
ttacaacaaggctatcccaaagaaacagctaaccaagtgtacgattatattgagcgcttt
gctaattatggctttaaccgctcgcatgcatttgcctattcctttattggttttcaaatg
gcttacttgaaggttcattatccgagtgctttttatgtcgcattgttgcattctgttcgt
cataatccaacaaaaattaaagaatatattggcgaagctagaaaaaacaagcagacgatt
ttgcagccgtcaattaaccaaagtcactacagcttttacctaaatcagcaacagcaaatt
ttatttggttttagttctttaaaaggaatccgccgagacttcattcaaaatattttaaat
gaacgccgagaaaatggaccgtacaaaacgttcgatgagtttcttttgcgaattgaccgt
aagtggttgaaagttgaaaatatcgaaccattgattgccatcggtgcatttgacgaaatt
gcgcctaatcgccgtcaattagcggtaggtttagagagtaatatccaaagtattcttctc
agcggtggtagtatggatttgttagaaacgttgaagcccaaggaagaagaaattgccgat
tatccgctagaagagcgactagaacaagaagaacaatatttaggggtctatttatcagga
catccgacagaagagttcaaaaaaacacgcttagccaagcaaacgcaacttgttcatgaa
cttgttgaaaatcagcccacgaaattattgatttatgtcaaaaacattcggacgattcgg
accaaaaagggagaacaaatggcctttgttgatggggatgatacaacaggaagtatttca
ctaacgttgttcccaactgtttttcgccagttaagacagagtgtcgagaaagggcaagtt
tattatgtggaaggaaaagtggaacgcagtacgtacaatcaagaattgcaaatattggtt
caacgaatagaaaaagcgcaacaagtagaaacatcaattagtgacgaaacgtgttttatc
agaattacaaaagatgtcgaacaaacggacgtttttcagaaaatgaaagaggtactcagt
cgtcatgctggacacattccagtgattgtctattttgaaaaaacaggaaagaaaatagta
ttaaatgaagaaaattgggtcgctcatacaagcgctagtcagcaacaattagcttacgtt
ttaggcgagcaaaacgtcattttcaaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (21)   

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