KEGG   Duffyella gerundensis: EM595_1437
Entry
EM595_1437        CDS       T04258                                 
Symbol
yceC
Name
(GenBank) putative pseudouridylate synthase
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
ege  Duffyella gerundensis
Brite
KEGG Orthology (KO) [BR:ege00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ege03009]
    EM595_1437 (yceC)
Enzymes [BR:ege01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     EM595_1437 (yceC)
Ribosome biogenesis [BR:ege03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    EM595_1437 (yceC)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 DUF3603
Other DBs
NCBI-ProteinID: CUU23671
UniProt: A0A0U5L5B7
Position
1:1556344..1557300
AA seq 318 aa
MKTNPPAVQIVAISADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKL
VAGDEIRIPPVRVAERDEQTVSPKLAKVASLADAILYEDDWILVMNKPSGTAVHGGSGLS
FGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALV
RGSWPSHLKVVQAPLLKNILQSGERVVRVNSEGKPSETRFKVEERYAHATLVKASPVTGR
THQIRVHTLHAGHPIAFDDRYGEQEFDRQLATTGLNRLFLHAAALTFTHPNSGEVMRMEA
PLDERLKQCLKVLRQQAQ
NT seq 957 nt   +upstreamnt  +downstreamnt
atgaaaacgaatcctcccgcggtacaaatcgttgccatttctgctgatgaagcagggcag
cgtattgataactttttgcgcactcagttaaaaggtgtgcccaaaagcatgatttatcgc
attttgcgtaaaggcgaagtgcgggtgaataaaaaacgcatcaaacctgaatataagctg
gtggcgggcgacgaaattcgcattccgccggttcgggttgccgaacgtgatgagcagacc
gtttcgccgaagctggcaaaagtggcctcgctggctgacgctatcctttatgaggatgac
tggattctggtgatgaacaagccttccggcaccgcggtgcatggtggcagcggattgagc
tttggtgtcattgaaggcttgcgtgcgctgcgtcctgaagcgcgtttccttgagctggtg
catcgccttgatcgcgacacttctggcgtgctgctggtggcaaaaaaacgctcggcgctg
cgttccctgcatgagcagctgcgtgagaagggcatgcagaaggattatctggcgctggtc
cgcggcagctggccgtcgcatttgaaagtggtccaagcgccgctgctgaaaaatatttta
caaagcggcgaacgggtggtgcgggtgaacagcgaaggtaagccttcagaaacacgcttc
aaagtggaagagcgctatgcgcatgccacgctggtgaaagcgagtccggttaccggcaga
acgcatcagattcgtgtccatacactgcatgccggtcatcccatcgcttttgatgaccgt
tatggtgaacaggagtttgatcgccagctggccactaccggtctgaatcggctttttctg
catgccgccgcgctgacgtttacccatcctaacagtggtgaagtcatgcgtatggaagcg
ccgctcgatgagcgcctgaagcagtgcctgaaagtattacgccagcaggcacagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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