KEGG   Eucalyptus grandis (rose gum): 104438409
Entry
104438409         CDS       T03547                                 
Name
(RefSeq) ubiquitin C-terminal hydrolase 22
  KO
K11366  ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
Organism
egr  Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:egr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:egr01002]
    104438409
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:egr03021]
    104438409
   04121 Ubiquitin system [BR:egr04121]
    104438409
   03036 Chromosome and associated proteins [BR:egr03036]
    104438409
Enzymes [BR:egr01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     104438409
Peptidases and inhibitors [BR:egr01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   104438409
Transcription machinery [BR:egr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     104438409
Ubiquitin system [BR:egr04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    104438409
Chromosome and associated proteins [BR:egr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     104438409
    SLIK complex
     104438409
SSDB
Motif
Pfam: UCH UCH_1 zf-UBP
Other DBs
NCBI-GeneID: 104438409
NCBI-ProteinID: XP_010049858
UniProt: A0A059CWR1
Position
3:complement(71020128..71023424)
AA seq 556 aa
MDPSSAKPRCSVPKPCNHLADYKLKYGLAGYDSLQDNFVTGSNGKTIVCTPDRKIPRCFF
CDGYRERLYLCLVCSSVSCLDHTLLHSRSDCGNDIAVDVKRSELYCGKCHDQVYDADFDT
AVVSKYKKDLIVCRNAFESIGERSSKRRRLSSAIDLDLKKWKELPCIRDQRAKSWYPIGL
RGLNNLGNTCFMNSVLQALLHAPPLRNYFLSGRHNRETCQRRSLDGFCLLCDIDIIFSAM
FSGDRSPYSPAQFLYSWWQHSANLASYTQQDAHEFFISLLDGIHEKENKLRDTNKDAGDC
PCIAHRVFSGLLRSDVTCLTCGFTSTTYDPFMDISLHLDSSPCSSTETTNKGSKLNGSTS
ISTSTLIGCLDLFTKPEKLGSDQKLHCQNCQEKQDSSKQLSIGRLPLALCLQVKRFEHSF
IRKTSRKIDWHLQFPFSLDMSPYLSSSIIRKRLGNRMISFDGDESDVSAEYEIFAVVTHS
GMLESGHYVTYLRLRNQWYKCDDAWITEVDEATVRASQCYMTFYVQKMLYHKANEEIGCA
PTSSRRDSLMSVVGYC
NT seq 1671 nt   +upstreamnt  +downstreamnt
atggacccgtcctcagccaagcctcgatgctccgtccccaaaccctgcaatcacctagct
gattacaagctgaaatacggcctggcgggctacgattccctccaggacaacttcgtcact
ggctcgaatgggaagacgatcgtttgtacgcccgataggaagatacccagatgctttttc
tgtgatgggtatcgcgaaaggctctacctttgcttagtttgctcttcggtctcttgcttg
gatcacaccctcttgcactcccgatctgattgtggaaacgacatagctgtcgacgtcaaa
agatccgagctttactgtgggaaatgtcatgatcaggtctatgatgctgattttgacact
gctgtggtgagtaagtataagaaggacctgatagtttgcagaaatgcttttgagagtatt
ggggagagatcgagtaagaggaggagattgagttctgcgatagatttggatttgaagaag
tggaaggagctgccttgtataagagatcagagggccaagtcttggtatccgattgggttg
agaggattgaataatttggggaacacctgtttcatgaattctgtgttgcaagcattgtta
catgcccctccgttgaggaattacttccttagcggtaggcataaccgcgaaacttgccag
aggagatcattagatggattctgtttgctttgtgacattgacattatcttctcggccatg
ttttcgggtgatcggagtccatatagcccagctcaatttctttacagctggtggcagcat
tcagcaaatctagctagttacacgcagcaagatgctcatgagtttttcatttcgctgttg
gatggtatccatgaaaaggagaacaaactaagggacacgaacaaagatgctggagattgc
ccatgtatagctcacagggtattttctggactcttaagatcagatgtcacctgtctgact
tgtggattcacttccacaacctatgacccttttatggacatttcacttcacttggattcg
agtccttgttcatcaacagagacaactaacaaaggttctaaattgaatggaagcacgagc
atatctacatcaaccctcattggatgtttggatcttttcacgaaaccggaaaagttggga
tcggaccagaaactacactgccaaaattgtcaagaaaagcaagattcttcgaagcaactg
tccattgggaggctccctttggcattgtgtcttcaggtaaaaaggtttgagcactcattc
ataaggaaaacatcaaggaaaatagattggcatttacagttcccattctctttggacatg
agcccctacttgtcctcctcgatcatcagaaagaggcttgggaatagaatgatttctttt
gatggcgacgaatctgatgtctcagctgaatatgagatatttgctgttgttacacattct
ggcatgctggaatcgggacactatgtgacttatctgcgcttaagaaaccaatggtataaa
tgtgacgatgcttggataactgaggtcgatgaggcgactgtccgagcttcacaatgttac
atgaccttctacgtgcagaagatgctgtaccacaaagccaatgaagaaattggttgtgca
ccaacttcctcacggagggattcacttatgtcagtagtaggttactgctag

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Ontology (6)   
   KEGG BRITE (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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