KEGG   Elaeis guineensis (African oil palm): 105044204
Entry
105044204         CDS       T03921                                 
Name
(RefSeq) BRCA1-associated RING domain protein 1
  KO
K10683  BRCA1-associated RING domain protein 1
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    105044204
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egu03019]
    105044204
   04121 Ubiquitin system [BR:egu04121]
    105044204
   03036 Chromosome and associated proteins [BR:egu03036]
    105044204
   03400 DNA repair and recombination proteins [BR:egu03400]
    105044204
Messenger RNA biogenesis [BR:egu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     105044204
Ubiquitin system [BR:egu04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   BRCC complex
    105044204
Chromosome and associated proteins [BR:egu03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     105044204
DNA repair and recombination proteins [BR:egu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     105044204
SSDB
Motif
Pfam: BRCT BRCT_2 zf-HC5HC2H zf-HC5HC2H_2 zf-RING_6 zf-C3HC4_2 zf-C3HC4_3 zf-RING_UBOX PTCB-BRCT zf-RING_2 zf-RING_10 RTT107_BRCT_5 zf-C3HC4_4 zf-RING_5 zf-C3HC4 PIG-L
Other DBs
NCBI-GeneID: 105044204
NCBI-ProteinID: XP_010920325
UniProt: A0A6I9R4J5
Position
4:complement(54740202..54748657)
AA seq 756 aa
MLPPNESGLPALKVIPTVHSRWAPAQLFVREETLNDPHRPRLRKHAHRPRFRVFDAMSTT
SFPLKTQNLTPRARERERERMAELEGFRRLLNPLVLNLQKMELELTCPICLKLLNMPRLL
PCNHISCSSCVTISTMHGHDCPICKVPFHHQDLRPSIHVEIMVNIYKSMNSAVGAILTQR
GEQVAISDTKMPSGGSPDFGDRNDEEKSEEEPIHNRDGEGSKYMQSHAPIFGNFRTGNPR
CVGEKNEPAMNISKKDVQSNGVEAFLQEKKLYSPQSSGDQKESDYDSNDMGNEPRNGNDS
CKRGSKVGTSQTGEDYIRDSKRQKLGNAVDVGDITGDVHAKEFSIFNSESVHEHQRCPNI
KSLHTTVHEDMNELFICAFCHSTRTTEASGPMLHYIDGKPVPDDQALQLNVLHVHQKCIE
WAPQVFFVGETAVNLDAELARASKIKCSSCGLKGAALGCYVKSCRRSFHVPCAADIQDCR
WDAENFLLLCPVHFSHKLPCERSKARKKTKANRSLCYSSSPGDLTSPTKQQSDKLWTASP
SVTQEWLLCGSSLSNMEKDALNDFVSLTGASVTNTWKANVTHVIAATDEHGACSRTLKVL
MAILRGKWVLNVEWLRACIKAGHPVPEEPHEISHDIHGAFDGPRNGRIRAMQKAPKLFTG
LTFYFSGHFMPYYKDHLEDLIVAAAGTVLEKSEITPTTFIVYSTEPPQGSNSDGQHEVIK
KRKEEAEDLAARIGSRAIPHTWLLDSIASCNIQLNL
NT seq 2271 nt   +upstreamnt  +downstreamnt
atgttacctccaaatgaaagtggacttcccgcgctcaaagtgattccaacggttcactca
cgctgggcgcccgcgcagcttttcgtccgggaggagacgttgaatgatccccaccgtccg
cgtctccgaaaacatgcccatcgcccgcgctttcgagttttcgatgccatgagtacgaca
tcctttcctttaaaaacccaaaacctcactccgcgagcgagagagcgagagagagagaga
atggcggagctagaggggttcaggagattgctcaaccctttggtacttaatctgcagaag
atggagttggagctcacgtgtcctatctgtttaaagttgcttaacatgccaaggttgttg
ccatgtaatcacatatcttgcagttcttgtgtcactatttcaactatgcatggacatgac
tgtcctatttgtaaagtaccttttcatcatcaagatttgaggccttctattcatgttgaa
ataatggtgaacatatataaaagcatgaattcagctgttggtgctatcctcacacaacga
ggggaacaagttgctatctctgacacaaagatgccttcaggtggaagtccagattttggt
gacagaaatgatgaggagaaatctgaagaggaaccaatacataacagggacggagagggt
tcaaaatatatgcaatcacatgcaccaatttttgggaactttagaactgggaatccaaga
tgtgtaggggagaaaaatgagcctgcaatgaatataagcaagaaagatgtacaaagcaat
ggagtggaagcatttcttcaagaaaagaaactatacagtccacaatcttctggtgaccag
aaagagtcagattatgacagcaatgacatgggaaatgaacctagaaatggtaatgattca
tgcaagagaggttcaaaagttggaactagtcaaacaggagaagactatattagagactca
aaaaggcagaaattgggtaatgcagttgatgttggagatattactggtgatgtccatgct
aaggaattttcaatatttaattctgaatctgtacatgaacatcaaagatgcccaaatatt
aagtcattgcatacaactgttcatgaagacatgaatgagctttttatttgtgcattttgc
cattctactagaaccactgaggcttctggaccaatgttacattatattgatggaaaacca
gtgccggatgatcaagcattgcagctcaatgtcttacacgtccatcagaaatgcattgaa
tgggcaccacaggtattctttgttggtgagactgctgtgaatttagatgctgaacttgca
cgtgcatcaaaaatcaaatgtagcagctgtggactcaagggagcagctcttggttgctat
gtcaagagctgccgaagaagctttcatgtcccatgtgctgctgatatccaagattgtaga
tgggatgctgaaaattttcttttgctgtgtcctgttcatttttcacacaagctgccatgt
gagagatcaaaggctcgaaagaagaccaaggctaatcgttccttgtgctattccagttca
ccaggtgatttaacttcacctacaaagcaacagagtgataaactttggacagcttcaccc
agtgtgactcaggaatggttgctatgtggatcttcactttctaacatggagaaggatgct
ctaaatgactttgtgagcctaaccggtgcctctgtaaccaatacgtggaaggcaaatgta
acacatgtgattgctgccactgatgagcatggtgcttgcagcagaacactgaaggtgctc
atggctatattgcgtggaaaatgggttctaaatgtagaatggctaagagcatgcataaag
gctgggcacccggttccagaggagcctcatgaaatcagccatgacattcatggggcgttt
gatggacccagaaatggaagaataagagccatgcaaaaggcaccaaaactgtttacagga
ttaaccttttattttagtggtcattttatgccttactacaaggaccatcttgaagatttg
attgttgctgctgctggaactgtattggagaagagtgaaatcactcctacaacttttatt
gtttatagtacagaacctccacaaggaagcaattcagatggtcagcatgaggttataaag
aagagaaaagaggaggctgaagatttagcagctagaattggctctcgggccattcctcac
acatggcttctggattctattgcttcctgcaatatacaactaaacttgtag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (30)   

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