KEGG   Elaeis guineensis (African oil palm): 105045403
Entry
105045403         CDS       T03921                                 
Name
(RefSeq) probable RNA-dependent RNA polymerase SHL2
  KO
K11699  RNA-dependent RNA polymerase [EC:2.7.7.48]
Organism
egu  Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:egu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:egu03036]
    105045403
Enzymes [BR:egu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.48  RNA-directed RNA polymerase
     105045403
Chromosome and associated proteins [BR:egu03036]
 Eukaryotic type
  Gene silencing
   RNA interference (RNAi) pathway
    RDRC (RNA-directed RNA polymerase complex)
     105045403
SSDB
Motif
Pfam: RdRP DUF6660 RRM_1
Other DBs
NCBI-GeneID: 105045403
NCBI-ProteinID: XP_010921974
UniProt: A0A6I9R7D4
Position
5:31159510..31168015
AA seq 1198 aa
MGSLGAQERDQKELVVSQVSFGGFDERVSAKDLTDFMEHEAGLIWRCRVKNSWTPPESYP
NFNVLDVSDVLRKDDHPKVVPHAFVHFATPDAAKRAINAAGKCELILNGHPLRANSGIDS
SFRINRRRTTDPFRFVDVGVEIGTLASRDEFLVAWKGPKLGVDFLIDPFDGCCRILFSKE
TAFAFKDIKEMAVIKCDFKVEFLVRDINEVKLFTDRYPHVMLFQLSSTPWVYYRTADDDI
HVTASFSLLDDEDPWIRTTDFTPGGAISRSSSYRVSFSPRYGRILEKSLAYLRERRIAEH
WPKRPLAVREEPEFGTLMPDPFFSVQYKEGISFSIMFLVDALVHKGIVNQHQLSEEFFAL
LRSQSDAVNEIALRHIWAYKTPIFDPRKRLKLVQDWLLKNPKLLKSSKLLDDSTEVRRLV
ITPTKAYCLPPEVELSNRVLRNYKKVADRFLRVTFMDEGMQPLNNNVLNYYVAPIVKELT
SNSFPQKTTVFRRVRNILLDGFHLCGRRYSFLAFSSNQLRDRSAWFFAEDSNTSVMAIRN
WMGKFANKNVAKCAARMGQCFSSTYATVDVPLDQFNPLLPDIERNGYVFSDGIGKIIPEL
AIEVAEKLQLTENPPSAYQIRYAGFKGVVAVWPADDDGVRLSLRPSMNKFESSHTMLEVV
SWTRFQPGFLNRQIVTLLSSLNVADSVFESMQDSMIYKLNQMLVDTDVAFDVLTSSCAEQ
GNTAAIMLSAGFKPQMEPHLKAMLSCIRSAQLGDLLAKARIFVPKGRWLMGCLDELGVLE
HGQCFIQSSIPSLENCFMKHGSRFSLLKKNRQVIVGTVAIAKNPCLHPGDIRILEAVDVP
SLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKKSWIPMDYTPAEPK
LQPRAVTPRDIIDFFLKNMVNENLGVICNAHVVHADRSEYGALDENCLQLAELAATAVDF
PKTGKLVTMPSGLKPKVYPDFMGKDDHMSYKSQKVLGRLYRNIKYAADNDVSTELPCTAE
ELPYDTDLDIPGASYYLADAWQNKCSYDGQLNALLAQYRVRSEGEVVTGHIWSLPKYNSR
KQGELKERLKNAYSALHKEFRRIFEDMGPDFQQLTDDEKSVSYEQRASAWYQVTYHPRWI
KRSGEIKEPDGDVVPARLSFAWVAADYLVRIKISSQDRQKFDNSRPIDTLACYLSERI
NT seq 3597 nt   +upstreamnt  +downstreamnt
atgggttcgcttggggcacaggagagggaccagaaggagttggtcgtcagccaggtcagc
ttcggcggctttgacgaaagggtctccgcgaaggacctcaccgatttcatggagcacgaa
gctggcttgatatggcggtgtagagtgaagaattcctggacgccgcctgaatcctacccc
aactttaacgtcctcgacgtgtccgacgtcctgagaaaggatgaccatccgaaggtggtt
cctcacgcttttgttcactttgccactcccgatgctgccaagagggcgatcaatgcagct
ggcaagtgcgagcttatcttgaatggccaccctctgagggcgaattccgggatcgacagc
tcgttccgcatcaaccggcggcggacaacggatccctttcggttcgtcgatgtcggtgtt
gagattggaacactggctagcagggatgaattcttggtggcttggaagggaccgaagttg
ggggtcgatttccttattgatcccttcgatgggtgctgcaggattcttttctctaaagag
actgcattcgccttcaaggatataaaagagatggcagtgataaaatgtgatttcaaggtg
gaattcttggtgagggacatcaatgaggttaagctgtttacagatcggtacccccatgtg
atgctttttcagctctcgtcgactccatgggtgtattacagaactgctgatgatgacatc
catgtgactgcctcgtttagtctgttggatgatgaagatccatggatcagaacgacggac
ttcactcctggtggtgcaattagtaggagttcttcatatcgtgtttcattttctcctcgc
tatgggcgtatattggagaaatcccttgcatatctgagggagcgtaggatagctgaacac
tggcctaaacgcccacttgcagttcgagaggagccagaattcggtacactcatgccggac
ccatttttctctgttcagtataaggaaggcatcagtttttcaataatgttcttggtagat
gcattggtgcataaaggaattgtcaatcagcaccagctctctgaagagttcttcgccttg
ttgaggagccagagtgatgcggtaaatgaaatagcactgaggcatatatgggcttacaaa
actcctatatttgatcctcgcaaaaggttgaagctcgtccaggactggctgctaaagaac
cctaagcttctcaagagctccaagcttttggatgatagcactgaagtgaggaggctggtt
ataacaccaacaaaggcatattgtctccccccagaggtagaactttctaacagggttctt
aggaattataaaaaggttgctgataggtttctgagggtgactttcatggatgagggcatg
cagccactgaacaacaatgttctaaattattatgttgctccaattgtcaaggaactgaca
tcaaactcattcccacagaagaccacagtgttcaggagggtgaggaatattttattagat
ggattccacctctgtggtagaaggtattcctttctagcattttcatctaatcagcttagg
gaccgatctgcatggttttttgcagaggatagcaacacatctgtgatggccatcaggaat
tggatggggaagtttgcaaataaaaatgtggcaaaatgtgcagctagaatgggacaatgt
ttttcatctacatatgccacagtggatgtgccactggatcagtttaatccattacttcca
gatattgaaagaaatggatatgtcttttcagatggcattggaaaaatcattccagagctg
gcaatagaagttgctgaaaaattgcaattaacagagaatcccccttctgcctatcaaatc
agatatgctggcttcaagggggttgtggctgtttggccagcagatgatgatggggttcgg
ctatcactaaggccaagcatgaataagttcgagtccagccacacgatgttggaggttgta
tcatggacgaggttccagccaggcttcttaaaccgacaaattgtgacattgctttcatcc
ttgaatgttgccgacagtgtcttcgaaagcatgcaggattcaatgatttataagctaaac
cagatgcttgtagatactgatgttgcatttgatgtacttaccagttcatgtgctgagcaa
gggaatacagcagcaataatgctgagtgctggctttaaacctcaaatggagcctcacttg
aaagcaatgctttcatgcataaggtctgcgcagctaggagatcttttggcaaaagcaaga
atttttgtcccaaagggaaggtggttgatgggttgtcttgatgaacttggggtactcgag
catggacaatgcttcattcagtcctcaattccttcattagaaaattgtttcatgaagcat
ggttcaagattttccttattaaagaaaaatagacaagtaattgttggtacggtggccata
gccaagaacccctgcctccatccaggagatattcggatccttgaagcagttgatgtacct
agcttgcaccatcttgttgattgcttggtattcccacagaaaggagataggcctcatgca
aatgaggcatcaggaagtgaccttgatggtgatctttattttgttacatgggatgaaaat
cttatacctccaagcaagaagagttggatcccaatggactacacccctgccgagcccaaa
cttcagccacgtgcggtgactcctcgtgacattattgacttctttttgaagaacatggtc
aatgaaaatcttggtgtcatttgcaatgctcatgttgttcatgcagaccgcagtgaatat
ggagcgttggatgaaaattgcctccaactggctgagctggcagctactgctgtagacttc
cccaaaacagggaagcttgtaacgatgccatcaggcctcaaacccaaagtatatcctgac
ttcatgggcaaggatgaccatatgtcctacaagtcccagaaggtcttgggaagactttat
cggaatattaaatatgccgctgacaatgatgtgtcaactgaactgccctgcactgctgag
gaattaccatatgatacagatcttgatatacctggggcctcatattaccttgctgatgca
tggcaaaataagtgctcatatgatgggcagctaaatgcgttgttggcgcagtacagagtt
agatcagaaggggaggttgtaaccggccatatttggtccctgccaaaatacaatagcagg
aagcagggggagctgaaggagcgactaaaaaatgcatactctgctctccacaaggaattt
aggcgcatattcgaggatatggggcctgattttcaacaactcacagatgatgagaagagt
gtatcatatgaacaaagggcttcggcatggtaccaagtgacttaccacccccggtggatt
aagaggtcaggtgaaatcaaggagccagatggggatgtagtgcctgcgcggctcagcttt
gcatgggtagcagctgattacctggttcgaatcaagataagttcacaagataggcaaaag
tttgacaatagcaggccaattgatacacttgcatgctatctttcggagaggatatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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