KEGG   Elaeis guineensis (African oil palm): 105046549
Entry
105046549         CDS       T03921                                 
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU70
  KO
K10884  ATP-dependent DNA helicase 2 subunit 1
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    105046549
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:egu03041]
    105046549
   03400 DNA repair and recombination proteins [BR:egu03400]
    105046549
Spliceosome [BR:egu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    105046549
DNA repair and recombination proteins [BR:egu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     105046549
SSDB
Motif
Pfam: Ku_N Ku Ku_C SAP HeH
Other DBs
NCBI-GeneID: 105046549
NCBI-ProteinID: XP_010923465
UniProt: A0A6I9RC61
Position
6:complement(2990410..3020379)
AA seq 629 aa
MDLDPEGLFRDDSDSESEFYQEKDFTKEFVVYLVDASPKMFGAAGSDEDEKTDTHFHVAI
NCISQSLKAQIIGSSYDEVAVCFFNTKEKKNLQDLNGVYVFNVTDRECLDRPTARLIKEF
FYVEDTFMSNIGSRYGIVSGSQENSLYNALWVAQALLRKGSSKSVSKRILLFTNEDDPFG
SITGATKTDMIRMTLQRAKDAQDLGISIELLPLSRPDEGFNVSIFYAELLGLEGDEISHF
LPSAGEKLEDMTDQLRKRMFKKRKVKTIRFSIANGICIEVNTYALIRSTSPGSIMWLDSI
TNLPLKTERSFVCADTGALVEEPRIYFHPYKNEIIKFSTDELSKIKKVSNGQLHLLGFKP
LDCLKDYHNLRPSTFIFPTDEEVVGSTRIFIALHRSMLRLQRFALAFYGSLYRPQLVALV
AQDEITGSSGQVEPPGMHMIYLPYSDDIRHVEELHMSADAIAPRATDDQIKKASALLRRI
DLKDFSVCQFTNPALQRHYGILQALALGEDEMPDIKDETLPDEEGLSRPGIVRALQEFKI
SVYGENYDQEEANAAAAKGCGSEASRKRKAMAETAARESASYDWADLAENGKLKDLTVVE
LKYYLTAHNLPVTGKKEALISRILTHLGK
NT seq 1890 nt   +upstreamnt  +downstreamnt
atggatttggacccagaaggcctatttcgggatgattccgactccgagagcgagttctat
caggaaaaagatttcacgaaagagtttgtagtctacctcgttgatgcgtccccgaagatg
ttcggtgcagcaggaagtgatgaggatgagaaaacagatacacattttcatgttgcaata
aattgtatttcccagtcattgaaggcccaaattattggtagctcctatgatgaagttgca
gtttgtttctttaacactaaggaaaagaaaaacttgcaggatttaaatggtgtctatgtc
ttcaatgttacggacagagaatgtcttgataggccaacagcaaggttaattaaagagttc
ttttatgtagaagatacatttatgagcaacattgggagtcgatatggtattgtttccgga
tctcaagagaattcgttatacaatgctctttgggttgcacaggcgctgttgcgcaagggc
tcttcaaaatctgtgagcaagcgaattctactgttcactaatgaagatgatccttttggg
agcataacaggggcaacaaaaacagacatgattaggatgacactgcaacgtgcaaaagat
gcacaagaccttggcatctcaattgaacttcttcctttgagtaggccggatgaggggttc
aatgtatccattttttatgctgaattgcttggattggaaggtgatgagatatcccacttt
ttgccatctgcaggtgaaaaattggaagatatgacagatcagctgagaaaacgaatgttt
aaaaagcgcaaagtcaaaaccatcagattctctattgcaaatggcatctgtattgaagtg
aatacatatgctttgatccgctcaacttcaccagggtcaataatgtggcttgattccatt
actaatcttccattaaagacagaaaggtcctttgtatgtgcagacactggagctctagtt
gaagagccacgtatatattttcacccttacaagaatgaaatcataaaattttctacggat
gaactatctaagataaagaaagtttcgaatggtcagcttcaccttttaggattcaagcca
ttggattgtttaaaagattatcacaatttgaggccatcaacatttatttttccaactgat
gaggaagttgttggaagtactcgcattttcattgctttacataggtcaatgttacgcctt
caacggtttgcacttgcattttatggaagcttatatcgtccccagctggttgcccttgtt
gcacaagatgaaataaccggttcaagtggtcaagtggagcctcctggaatgcatatgata
tatcttccatactcagatgatattagacatgtcgaagagctccatatgtctgctgatgct
attgcaccacgtgccacagatgatcaaatcaagaaagcctctgctttattgagacgaata
gatttaaaagacttttcagtctgccaatttacaaatcctgctttacaaagacattatggg
atactacaagccttagctttgggtgaagatgagatgccagacatcaaagatgaaacctta
cctgatgaagaaggcctgtctaggccaggaattgtccgtgcacttcaagaattcaaaata
tctgtttatggtgaaaactatgatcaggaggaagccaatgctgcagctgcaaaagggtgt
ggaagtgaagcttctcgaaagcgtaaagcaatggctgaaactgctgcaagggagagtgca
agttatgattgggctgatctagcagaaaatggaaagctgaaggatctaactgtggtggag
ttaaagtactacctaactgctcacaacctcccggttactgggaagaaagaggctttaatc
agcaggatcttaactcacttgggcaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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