KEGG   Egretta garzetta (little egret): 104127413
Entry
104127413         CDS       T05152                                 
Symbol
TOP1MT
Name
(RefSeq) DNA topoisomerase I, mitochondrial isoform X1
  KO
K03163  DNA topoisomerase I [EC:5.6.2.1]
Organism
egz  Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:egz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:egz03032]
    104127413 (TOP1MT)
Enzymes [BR:egz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     104127413 (TOP1MT)
DNA replication proteins [BR:egz03032]
 Eukaryotic type
  DNA Topoisomerases
   104127413 (TOP1MT)
SSDB
Motif
Pfam: Topoisom_I Topoisom_I_N Topo_C_assoc CCDC93_CC DUF641 DUF4407
Other DBs
NCBI-GeneID: 104127413
NCBI-ProteinID: XP_009638377
Position
Unknown
AA seq 593 aa
MFRCLTSSLLGRRICPPQLIPICLRPGSGGCSGWEEEKKEDGVKWTQLEHRGPYFAPLYE
PLPDDVQFYYDGQPLKLSLATEEIATFYAKMLDHEYTTKEIFQNNFFNDWRKEMTSKEQK
IIKDLDKCDFREIHKYFVDKSEARKALSKEEKQKLKEEADKIQEEYGYCILDGHREKIGN
FKTEPPGLFRGRGDHPKMGMLKKRIMPEDVVINCSKDSKIPEPPEGHKWKEVRFDNTVTW
LASWTENIQNTLKYIMLNPSSKLKGEKDWQKYEVARRLKDVVHKIRAQYRADWKSKEMKK
RQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLHPKLDGQEHVVEFDFLGK
DSIRYYNKVSVEKLVFKNLQLFMKNKDPADDLFDRLNTTILNRHLQSLMDGLTAKVFRTY
NASITLQEQLKALTNSEDNVAGKLLSYNRANRAVAILCNHQRSTPKTFEKSMQNLQTKID
AKKQQVEEAQKELKKAEDEFEDTKDAKAEANVEKKKKLLKRLEEQLAKLNVQATDKEENK
QIALGTSKLNYLDPRISIAWCKKFGVPIEKIYNKTQREKFAWAIDMADEDFEF
NT seq 1782 nt   +upstreamnt  +downstreamnt
atgtttcgttgtctcacctcctcgttgcttggccgcaggatctgtcccccccagctcatc
cccatttgcctccggccaggttcggggggctgcagcgggtgggaagaggagaagaaagaa
gatggggtaaagtggacacaactggagcaccgaggaccctactttgcccccctctacgaa
ccactgcctgatgacgtgcagttttactatgatggccaacccctgaagctgagcctggcc
acggaggaaattgccaccttctatgccaaaatgcttgatcatgagtacacgaccaaggag
atcttccagaacaacttcttcaatgattggaggaaggagatgacctcaaaggagcagaag
ataatcaaggacctggacaagtgcgacttcagggagatccacaagtacttcgtggacaaa
agcgaggcacggaaagcactctccaaagaggagaagcagaaactgaaggaggaggcagat
aagatccaggaggagtatgggtactgcatcctggatgggcaccgggagaagataggcaac
ttcaaaactgagccgccagggctgttccgtggacgtggtgaccaccccaaaatgggcatg
ctgaagaagaggatcatgccagaagatgttgtcatcaactgcagcaaggactccaagatc
cctgagccaccagaagggcacaagtggaaggaggtgcgctttgacaacacggttacctgg
ctggcctcgtggacagaaaacatccagaacactttgaagtacatcatgctgaaccccagc
tccaagctgaagggggagaaagactggcagaagtatgaggtagcccgacgcttaaaggat
gttgtccacaaaatccgtgctcagtaccgagctgattggaagtccaaggagatgaagaag
cgacaaagagcagtggccctctacttcattgataagctggccctgcgagctggcaatgag
aaggaggaaggagagactgcagacacagttggctgctgctccctgcgtgtagagcacatc
aagctgcaccccaagctggatgggcaggagcacgtggtggagtttgacttccttgggaaa
gactcaatccgttactacaacaaggtgtcagtggagaagctggtgttcaagaacctgcag
ctattcatgaagaacaaggacccagcagatgacctctttgacaggctcaatacaaccatc
ttgaacagacacctccagagtctgatggatggtttgactgccaaagtgttcaggacctac
aatgcctccatcaccctgcaggagcagctcaaggcactcacgaactctgaagacaacgtt
gcgggaaagctcctctcttacaaccgagctaaccgagctgtggccatcctgtgcaaccat
cagaggtctacaccgaaaacttttgagaagtcaatgcaaaaccttcagaccaagatcgat
gccaagaagcaacaggtggaggaagcccagaaagagctgaaaaaagctgaagatgagttt
gaagacacaaaagatgccaaagcagaagccaatgtggagaagaaaaagaaactgttgaag
cggctggaagagcagctggccaagctgaatgtccaggccacagacaaggaggagaataag
cagatagctctgggcacgtccaagctgaattacctggaccccaggattagcatagcctgg
tgcaagaagtttggcgtgcccatcgagaagatctacaacaagacccagagggagaagttt
gcctgggcaatcgacatggccgacgaggactttgaattctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (35)   

Download RDF
DBGET integrated database retrieval system