KEGG   Egretta garzetta (little egret): 104128370
Entry
104128370         CDS       T05152                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
egz  Egretta garzetta (little egret)
Pathway
egz03420  Nucleotide excision repair
egz04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:egz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104128370 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104128370 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:egz04121]
    104128370 (ERCC8)
   03400 DNA repair and recombination proteins [BR:egz03400]
    104128370 (ERCC8)
Ubiquitin system [BR:egz04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104128370 (ERCC8)
DNA repair and recombination proteins [BR:egz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      104128370 (ERCC8)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Nup160
Other DBs
NCBI-GeneID: 104128370
NCBI-ProteinID: XP_009639426
Position
Unknown
AA seq 341 aa
MLSGGSDGVIVLYDLENLSRKPSYTCKALCSVGRSHPDVHRFSVETVQWYPHDTGMFTSS
SFDKTLKIWDTNTLQPAEVFRFEGTIYSHHMSPVATKHCLIAVGTKSPKVQLCDLKSGSC
SHILQGHRQEILAVSWSPRHEYILATASADSRVKLWDVRRASGCLTTLDQHNGEKSKASS
EAANTAHNGRVNGLCYTNDGLHLLTIGTDDRMRLWNSSTGENTLVNYGKVYNESRKGLKF
TISCGCNPEFAFVPYGGTIAVYTIFTGELITMLRGHYSTVNCCVFQCNFQELYSGSKDCN
ILAWIPALQEPLPDNVSEKNLPQQHLNPAYEDAWSSSDNEG
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgttatccggtgggtcagatggtgttattgtactttacgaccttgaaaacttgagcaga
aaaccaagttacacatgtaaagctctttgttctgtgggaaggagccatcctgatgtacat
agattcagtgtggagacagtccagtggtatcctcatgacactggcatgtttacatccagc
tcatttgataaaaccttgaaaatatgggatacaaatactttacaacctgcagaggtattt
cgctttgagggaacaatctatagccatcacatgtctccagttgctacaaagcattgttta
atagcagttggtaccaaaagccccaaagtacagctctgtgacttgaagtctggatcctgt
tctcacattctgcagggtcacaggcaagaaatactggcggtgtcttggtccccacgtcat
gaatatattctggcaacagcaagtgctgacagtagagtaaaattatgggatgtgaggaga
gcatctggatgtctgactacgcttgatcagcacaatggagaaaagtccaaagcatcttct
gaggcagcgaatactgctcacaatgggagagttaatggtttatgctatacaaatgatgga
cttcatctgttgaccattggtacagatgatcggatgcgactctggaacagctccactgga
gaaaacacattagtgaattatgggaaagtctataatgaaagtagaaaagggctcaaattc
accatctcttgtggctgtaatccagagtttgcctttgtaccgtatggtggtaccattgct
gtttatacaattttcacaggagaactgataactatgcttagagggcattatagtactgtc
aactgctgtgtgtttcaatgtaattttcaggaactttatagtggtagcaaagactgcaat
atccttgcatggataccggctcttcaagagccacttcccgataatgtttctgaaaagaat
ctgcctcaacaacacttaaatccagcatatgaagacgcatggagtagcagtgataatgaa
ggctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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