KEGG   Entamoeba histolytica: EHI_004190
Entry
EHI_004190        CDS       T00238                                 
Symbol
238.t00004
Name
(RefSeq) Nuclear valosin-containing protein
  KO
K14571  ribosome biogenesis ATPase
Organism
ehi  Entamoeba histolytica
Pathway
ehi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ehi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    EHI_004190 (238.t00004)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ehi03009]
    EHI_004190 (238.t00004)
Ribosome biogenesis [BR:ehi03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    EHI_004190 (238.t00004)
SSDB
Motif
Pfam: AAA AAA_25 DUF815 AAA_16 ATPase_2 Rad17 TniB AAA_22 NACHT nSTAND3 RNA_helicase AAA_5 AAA_14 AAA_24 AAA_18 AAA_29 AAA_33 ABC_tran Iron_permease AAA_28 AAA_23
Other DBs
NCBI-GeneID: 3404497
NCBI-ProteinID: XP_650199
UniProt: C4LYP3
AA seq 712 aa
MKKLINENIIVYTKDIDTNKITFPKEGIYRVGMYLLSTESFCLPFYWNGSRNEADFIEFP
YFCFGININKKITSSLYELEKLPTSITELTLSCLSDEQFEQVKRLTNKLRKELLNFPCLF
RQNDLVSICGEPFHVDSIDQSQINNFDTFYICDSHTTLSVLFQHELELQVMIDSSLNTSV
GLSSLFYKNSRYVQLCTKQPSVFEIEPLNISSSIILISPLIASYFKLTHLSKISVLFINI
PNTVLPWVHISSQICVGSFFQRCVPIFNSLPIYINSIPVVLTSSQLGFISKTTRFIVDTG
YSFKSTFSSLKPLLPSVIKLNDSIHLISKNNLQLFHYAIDHQLSLSLSLSGNVSFCLDVF
SILFRLSIFPFHFNFYNYCVISLESITSPLLTKQFIEIKKEPTIVMFIRTNKATDSVIST
TQRFIEDCERFHLPIISLFYPSVEFVISTIQIKENKQSHTIFQEKKIFGYIEQRKKLEEV
ILSMSHPIQPLKPSGILLYGPSGCGKTTLVEDFCYHHSWLNIKIIRGSELLSKYVGESER
NVRELFDETVDLIVFDDFDSLGHRRDGEKTDSVVNTLLTMLDGVAERKTAVVALSNRPDL
IDPALLRGGRLGDWIYLGLPSDNDKEEVLSTMCSMTWSNFSLKTKDWTMGDIVSCLQKIS
GVILQTQDKEKKINILKTAIETFKASGPMMDFSPFKQFVINTSSIGRDMVLI
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgaaaaaattaataaatgaaaatattattgtttatacaaaagacatagatacaaataag
attacttttccaaaagaagggatatatcgagtaggaatgtatttactttctactgaatct
ttttgtttacctttttattggaatggctccagaaatgaagctgattttattgagtttcct
tatttttgttttggtataaatataaataagaagataacttcttctttgtatgaactagaa
aaactaccaacatctattacagaactaacattatcttgtttgtctgatgagcaatttgaa
caagttaaacgattaacaaataaactaagaaaagaacttttaaatttcccatgtttattt
cgtcaaaatgatcttgtatcaatttgtggtgaaccttttcatgttgattcaattgatcaa
agtcaaattaataattttgatacattttatatttgtgatagtcatacaacattatcagtt
ttgtttcaacatgagcttgaacttcaggtaatgattgactcttctttaaatacgagtgtt
ggactaagttcattgttttacaaaaattcaaggtatgtgcaattatgtacaaaacaacca
tcagtttttgaaattgagccattgaacatctcttcttctatcattcttatttcaccctta
atagcctcatattttaaattgacacatctctcaaaaatctctgtgttatttataaatatt
cccaatacagttttaccttgggtacacatttcttcacaaatatgtgtgggatcatttttc
cagcgttgtgtaccaattttcaattcattacccatttatattaattctattccagttgtg
ttgacatcttcacaacttggttttatttcaaaaacaacacgtttcatagtagatactggt
tattcctttaaatcaactttttcgagtttaaaaccattactaccttcagtaattaaatta
aatgattctattcatcttatttcaaaaaacaatcttcaattatttcattatgctattgac
catcaattgtcattatctctttcattgtctggaaatgtttctttttgtttggatgtcttt
tctattcttttcagattatcaatctttccctttcattttaacttttacaattattgtgta
atatcattagaatcaataacatcgccattacttactaaacaatttattgaaataaaaaaa
gaacctacaattgttatgtttattagaactaataaggcaacagattctgttattagtacg
actcaaagatttattgaagattgtgaaaggttccatcttccaattatatcattgttctat
ccttctgtagaatttgtaataagtactatccaaattaaagaaaataaacaaagtcatact
atttttcaagaaaagaaaatttttggatatattgaacaacgaaagaaattagaagaagta
attcttagtatgagccatccaattcaaccattaaaaccatctgggattttattatatgga
ccgagtggatgtggaaaaacaacattggttgaagatttttgttatcatcattcttggctg
aatatcaaaattattcgtgggtcagaattacttagtaagtatgttggagagtctgaaaga
aacgttagagaattatttgatgaaacagtagaccttattgttttcgatgattttgattca
ttggggcatcgaagagatggagagaagactgattctgttgttaatacattgttaacaatg
ttagatggagttgctgaaagaaagactgctgttgttgctctttccaatcgtccagattta
atagacccagcattgttgagaggaggaaggttaggtgattggatctatttaggattacct
tctgacaatgataaagaggaagttttgtctactatgtgttcaatgacatggagtaatttt
tcgttaaaaaccaaggattggacaatgggtgatattgtttcttgtttacaaaaaatttca
ggagttattttacaaactcaagacaaagaaaaaaaaattaatatccttaaaacagctatt
gaaacatttaaagcatctgggccaatgatggacttttcaccatttaaacaattcgtaatt
aatacttcttccatagggagagatatggtattaatttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (21)   
   Pfam (21)   
All databases (78)   

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