KEGG   Enterococcus hirae: EHR_02890
Entry
EHR_02890         CDS       T02160                                 
Name
(GenBank) RecD/TraA family helicase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
ehr  Enterococcus hirae
Pathway
ehr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ehr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    EHR_02890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ehr03400]
    EHR_02890
Enzymes [BR:ehr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     EHR_02890
DNA repair and recombination proteins [BR:ehr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     EHR_02890
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 SH3_13 UvrD_C_2 AAA_11 Viral_helicase1 HHH_5 UvrD-helicase AAA_22 T2SSE IMS_HHH TBPIP SLFN-g3_helicase AAA HHH AAA_28 NTPase_1 AAA_12 HHH_8 Zeta_toxin 5_3_exonuc nSTAND3 AAA_16 AAA_29 RecR_HhH HTH_IclR
Other DBs
NCBI-ProteinID: AFM69554
UniProt: I6T8K8
Position
complement(522476..525091)
AA seq 871 aa
MQPEEMPYFVGTVAAIFFQNPSNFYKVLLVRLTETTADYREKEIVVTGSFGEIQENELYR
FYGELVDHPKYGRQLKVERYEQEKPTTVNGIVGYLSSEKFPGIGKKTAEKIVEQLGEEAI
EKIIEEPSVLEQIAGLNQAKRDMIVETIRLNHGMDQVIMGLNRYGFGSQLAFSIYQTYKN
EALDIIQENPYQLVEDVEGIGFKRADNLAEQLGIAADSPRRIRAAVLHQIFQHAVQTGDT
YVPAETLLHQTIKILETSRPIEIQPDQVATVIIQLVEEGKIQQEETNLYENSLYFSEWGI
GNSIQRLLSRKKEINYDEKEVQKNIRRIEKIFGIQYGESQEKAISEAIRSPLFILTGGPG
TGKTTVINGIVNLFAELNGLELDPNKYTQEIFPILLAAPTGRAAKRMNETTGLPASTIHR
LLGLNGREKSPSVSTKELEGGLLIIDEMSMVDTWLANTLFKAIPTNMQVILVGDKDQLPS
VGPGQVLHDLLGIDQIPKVELNQIYRQGDGSSIIPLAHEIKEGHLPSDFLQNQKDRSFFR
SDAYSIEPLIAKIVEKAKNKGFTAQDIQVLAPMYRGPAGIDALNKMMQSIFNPGGAGRKE
VHWNETVYRIGDKVLQLVNTPELNVFNGDMGEITGIVLAKDSEDKVDELVIQFDANEVTY
KRNEWNKITLSYCCSIHKSQGSEFKMVILPMVHQYQRMLQRNLLYTAVTRSKELLILLGE
EQAYVTCVANESASRMTTLKKRIEENDSMSLVTRTKLVAYEDSLVGNDPFEEGNYTKAGE
TAHSVKTETSQQATQENVVDSTEGNVGDDLFTLSVEQDTTETAVESKVMEEAPTEQLPKT
YILTTEAIEKQWIDPMIGMEQEAVKEAFSSE
NT seq 2616 nt   +upstreamnt  +downstreamnt
atgcagccagaagaaatgccttattttgttggtacagttgccgcaatcttttttcaaaat
ccaagtaatttttataaagtactgttggttcggctcactgaaacaacagctgactatcgt
gaaaaagaaattgtggtcactggaagctttggtgagatccaagaaaatgagctttatcgt
ttttacggcgaattagtcgatcatcctaaatatgggcgacagttaaaggttgaacgctat
gagcaggagaaaccaacaacagtcaacgggatcgtgggttatctatccagtgaaaaattt
cctgggattggcaagaaaacagctgagaagatcgtggagcaactaggtgaagaagcgatt
gaaaaaatcatcgaagagccgtccgtattagaacaaatcgcaggcttgaatcaggccaaa
agagatatgatcgttgagacgattcgtttgaaccatgggatggatcaagtgatcatgggc
ttgaatcgttatggctttggtagtcagttagcttttagtatctatcaaacatataaaaat
gaagctttagatatcatccaggaaaatccctatcagttagtcgaagatgtggaagggatc
ggctttaaaagagcagataatcttgcagaacaattagggatcgcggctgattcaccaaga
cggattcgagctgcagttttacatcagatttttcaacatgctgttcaaactggcgataca
tatgtaccagctgaaacgcttcttcatcaaacaatcaaaattttggaaaccagtcgacca
atcgagatccaacctgatcaagtggcgacggtcattattcaacttgtggaagaaggtaag
atccaacaagaagaaaccaatctctatgaaaatagtctgtatttctcagaatgggggatc
ggtaactcgatccaacggttacttagtcggaaaaaagaaatcaactatgacgaaaaagaa
gtgcagaaaaacattcggcgaattgaaaaaatatttggtatccaatatggagaatcgcaa
gaaaaagcaatttcggaagcaatccggtcacctttatttattttaactgggggtcccggc
acagggaaaacaacagttatcaatgggatcgtcaacttgtttgcagaattaaatggctta
gaattagatccaaacaaatatacccaagaaatttttccgattctactggctgcaccaact
ggtcgagcagccaaacggatgaacgagacgacaggattacctgccagtacgatccatcga
ctactaggtttgaatggtcgagaaaaatctccttcagtaagtacgaaagaattagaaggt
gggttgttgatcatcgatgaaatgtcgatggtcgatacatggctagctaatacgctattt
aaagccatccctaccaacatgcaagtgattttagtaggagataaagatcaattaccatct
gtcggaccgggacaagtcttgcatgatttattaggaattgaccaaatcccgaaagtggaa
ttgaatcaaatttatcggcagggagacggatcaagtattatcccccttgctcatgaaatc
aaagaaggtcatttaccaagtgattttttgcaaaatcaaaaagatcgttctttctttcga
agcgatgcctacagtatcgaacctttaatcgcaaagattgttgaaaaagccaaaaataaa
ggcttcactgcacaagatatccaagtcttggcgccaatgtaccgtggtccagctggaatc
gatgcgttaaacaaaatgatgcagtcgatttttaaccctggaggtgcagggcggaaagaa
gtccactggaatgagactgtttatcgaatcggtgataaagtattacaattagtgaacaca
cctgaactcaatgtgtttaatggtgatatgggtgagatcacggggatcgtgttagcgaaa
gattcagaagataaagtggatgaattagtgattcaatttgatgcgaatgaagtgacttac
aaacgcaatgaatggaataaaatcaccctttcttattgttgttcgatccataaatctcaa
ggaagcgaatttaagatggtcattttaccgatggttcatcagtaccaacggatgttgcaa
cggaatcttctctacacggctgtcacaagaagtaaagaactattgattctactaggggaa
gaacaagcttacgttacctgcgttgcgaatgaatcggctagtcgaatgacgacattgaag
aagcggatcgaagaaaatgacagtatgagtcttgttacacggacgaagcttgtcgcttat
gaagattcccttgtaggtaatgatccttttgaagaaggaaattataccaaggcgggagaa
actgctcattccgtaaaaacagagacaagtcaacaagccactcaagaaaatgtcgtagat
tcaacggagggaaatgttggcgatgatctctttactttatcagtagaacaagacacaacc
gaaacggctgtcgaatcaaaagtgatggaagaagcaccaacagagcaactgccaaaaaca
tatattttaacaaccgaagcgattgaaaaacagtggattgatccaatgattgggatggag
caagaggctgtgaaagaagcgtttagctccgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system