KEGG   Emiliania huxleyi: EMIHUDRAFT_433971
Entry
EMIHUDRAFT_433971 CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K03681  exosome complex component RRP40
Organism
ehx  Emiliania huxleyi
Pathway
ehx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EMIHUDRAFT_433971
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ehx03019]
    EMIHUDRAFT_433971
Messenger RNA biogenesis [BR:ehx03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     EMIHUDRAFT_433971
SSDB
Motif
Pfam: RRP40_S1 KH_6 Rrp40_N RRP4_S1
Other DBs
NCBI-GeneID: 17279581
NCBI-ProteinID: XP_005786739
JGI: Emihu1_433971
UniProt: R1F5W6
Position
Unknown
AA seq 251 aa
MPSAPAGLPLGSVVFPGDRVARVADFERVLLGSGVRREGPLLVSTRAGVLGWDTESSRLW
VEAEQRRYVPVLGDHVIGVVAEKHADEYRVDLGAAAPATLPVLSFDGATKRNRPHLAVGA
LVYARVVVANKDMDPEISCAAPPGVSSRDWVTRESLFGELLGGYSFDCPSGLCRAMAADA
PCPLLEALGAVAAFEVAVGVNGRVWVDAAQASMLILSQQAMLLCHTHPPESHQRLVQTLA
GGSDGYRGEGG
NT seq 756 nt   +upstreamnt  +downstreamnt
atgcccagcgcccccgccgggctcccgctcggcagcgtggtcttccctggcgaccgcgtc
gcgcgcgtcgccgacttcgagcgcgtgctgctcggctccggcgtccggcgcgaggggccg
ctcctcgtgtcgacgagggccggcgtgctcggctgggacaccgagtcgtcgcggctgtgg
gtcgaggcggagcagcggcggtacgttcccgtgctgggcgatcatgtgattggcgtcgtc
gctgagaagcacgccgacgagtaccgcgtcgacctcggcgccgccgcgccagccacgctg
cccgtgctcagctttgacggcgcgaccaagcgcaaccggccgcacctcgcggtgggcgcg
ttggtgtacgcgcgcgtggtggtggccaacaaggacatggatccggagatcagctgcgct
gcgccgcccggcgtctcgtcccgcgactgggtgacgcgcgagtcgctcttcggcgagctg
ctgggcggatactcgttcgattgcccgagcgggctatgccgcgcgatggcggcggacgcg
ccctgcccgctgctggaggcgctcggcgccgtggccgccttcgaggtggcggtcggcgtc
aacggccgcgtctgggtcgacgcggcgcaggcctcaatgctcatcctctcgcagcaggcg
atgctgctctgccacacgcacccgcccgagtcgcaccagaggctcgtgcagacgctggcg
ggagggagtgacggctaccgcggcgagggagggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (45)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (61)   

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