KEGG   Elizabethkingia miricola: VO54_00115
Entry
VO54_00115        CDS       T03757                                 
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
  KO
K01627  2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
Organism
elb  Elizabethkingia miricola
Pathway
elb00540  Lipopolysaccharide biosynthesis
elb01100  Metabolic pathways
elb01250  Biosynthesis of nucleotide sugars
Module
elb_M00063  CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:elb00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    VO54_00115 (kdsA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:elb01005]
    VO54_00115 (kdsA)
Enzymes [BR:elb01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.55  3-deoxy-8-phosphooctulonate synthase
     VO54_00115 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:elb01005]
 Lipid A
  VO54_00115 (kdsA)
SSDB
Motif
Pfam: DAHP_synth_1 NeuB tRNA-synt_2c
Other DBs
NCBI-ProteinID: AJW61609
Position
127869..128678
AA seq 269 aa
MIQALDKIKHKDSKNFFLIAGPCAIESEDLAMEVAEKVVQLTNQFNIPYIFKGSFKKANR
SRVDSFTGIGDIKALEILKKVGEKYDIPTTTDIHENEHAALAAQYVDVLQIPAFLVRQTD
LLIAAAVTGKAVTLKKGQFLSAESMKFAVDKVKDSGNDKIALIERGNSFGYTDLVVDFRG
IPTMRQYAPTILDITHSLQQPNQSSGVTGGRPELIETIAKAGIAVGADGIFIETHPNPAV
AKSDGANMLKLDYLEALLEKLTRVREAIL
NT seq 810 nt   +upstreamnt  +downstreamnt
atgattcaggcattagataagatcaaacataaagattctaagaacttctttcttattgca
ggaccttgtgctatcgaaagcgaagatctggctatggaagtagcggaaaaagtagttcag
cttaccaatcagttcaatattccatatattttcaaaggttcttttaaaaaagccaaccgt
tcacgtgttgacagttttaccggaataggagatattaaagcacttgaaatcctgaaaaaa
gtaggagagaagtatgatattcctacaacaactgatattcatgaaaatgaacatgcagca
ttagcagctcagtatgtagatgtattacagattcccgctttcttagtacgtcagacagat
ttattgatagcggctgccgtaacaggtaaagctgtaacactgaagaaaggacaattcctt
tctgcagaatctatgaagtttgctgtagacaaagtaaaagattcaggaaatgataaaata
gcactgattgaaagaggaaactcttttggttataccgatttggttgtagatttccgtggg
attcctacaatgcgtcagtatgcacctacaatattagatattacccactcgttacagcag
cctaaccaaagttcaggtgttacaggtggaagaccagagttaattgaaactattgctaaa
gctggtattgcagttggtgcagacggtatctttatcgaaacccatcctaatcctgctgtg
gcaaaatcggatggtgcgaacatgctgaaattagattatctggaagcattactggaaaaa
ctaacaagagtacgtgaagcaattttgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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