KEGG T03757: VO54

Elizabethkingia miricola: VO54_00382

Entry

VO54_00382        CDS       T03757

Symbol

gyrB_1

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

elb Elizabethkingia miricola

Brite

KEGG Orthology (KO) [BR:elb00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:elb03032]
    VO54_00382 (gyrB_1)
   03400 DNA repair and recombination proteins [BR:elb03400]
    VO54_00382 (gyrB_1)
Enzymes [BR:elb01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     VO54_00382 (gyrB_1)
DNA replication proteins [BR:elb03032]
Prokaryotic type
  DNA Topoisomerases
   VO54_00382 (gyrB_1)
DNA repair and recombination proteins [BR:elb03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      VO54_00382 (gyrB_1)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 Toprim_4 Pentaxin REF

Other DBs

NCBI-ProteinID:

AJW61871

Position

423595..425529

AA seq 644 aa
MSNKQYTASSIQSLEGIEHVRLRPSMYIGDVGLRGLHHLVYEVVDNSIDEALAGYCDTIT
VTIKEGNAIEVSDNGRGIPVDFHEKEQKSALEVVMTKIGAGGKFDKDSYKVSGGLHGVGV
SCVNALSTDMITTVYRDGHVYQQKYQKGRAVSEVEKIGDSDRKGTQQFFQPDDTIFTELV
YNYDTLATRLRELAYLNRGITITLTDERVKDENGNFKVEVFHSEGGLKEFVEFIDGNRES
IMEHVIFMEGERDDIPVEVAMRYNTSFNENLHSYVNNINTHEGGTHLAGFRRALTRTLKK
YADDLGLPAKEKVEITGDDFREGLTAVISVKVMEPQFEGQTKTKLGNSEVSGAVDKIVGE
MLTNFLEENPNEAKTIVQKVVLAAKARQAAKKAREMVQRKSPMGGSGLPGKLSDCSSKDP
AESELFLVEGDSAGGTAKQGRDRLFQAILPLRGKILNVEKSMLHKVYDNDEIKNIYTALG
VSVGTEEDSKALNLTKLRYHKIVIMTDADVDGSHISTLILTFFFRYMKELIENGYVYIAS
PPLYLVKKGNKKVYAWNEKEREELTQELSKDGKGVEIQRYKGLGEMNPEQLWDTTLNPEH
RTLKQVTIDNAVEADNVFSMLMGDEVPPRRDFIEKNAVYAKIDA

NT seq 1935 nt +upstreamnt +downstreamnt
atgagtaataaacaatatacggccagtagtattcagtcgttagaagggatcgaacacgta
cgtcttcgtccttcaatgtacatcggtgatgtaggattaagaggtttacaccatttggta
tacgaagttgtagacaactctattgacgaagctttggcaggctactgtgacacgattaca
gtaactataaaagaaggaaatgctattgaagttagtgataacggtagaggtattcctgta
gacttccatgagaaggagcaaaaatcggctttggaggtggtaatgaccaagattggtgcc
ggaggtaaattcgataaggattcctataaggtatccggaggcttgcacggtgttggggta
tcttgtgtgaatgcactttctactgatatgattacgactgtttacagagacggacatgtt
tatcaacaaaaataccagaaagggcgtgctgtttctgaggttgaaaaaattggagatagt
gacagaaaaggtactcagcagttcttccagccagacgatactatctttaccgagctggtt
tataactacgatactttagctacacgtcttcgtgaattagcttacctaaacagaggtatt
actattacattaaccgatgagcgtgtaaaagatgaaaacggaaacttcaaagtagaagtt
tttcattctgaaggtggtctgaaggagtttgttgagtttattgacggaaaccgtgaatct
attatggaacacgtaatcttcatggaaggagagcgtgatgatattcctgtagaagtagcg
atgcgttataacacttcatttaatgagaatcttcactcatacgttaacaatatcaatacg
cacgaaggaggtacgcatttagcaggtttccgtagagcattgaccagaactttgaagaag
tatgcagatgatcttggattgcctgcaaaagagaaagtagagattacaggggacgacttc
cgtgaaggacttacggctgtaatttctgtaaaagtaatggaacctcagtttgaaggacag
accaaaacaaaattaggtaactccgaagtttctggtgctgtagataagattgtaggggag
atgcttactaacttcctggaagaaaatccaaatgaagcgaagaccatcgtacagaaggtt
gttttagcagcaaaagctagacaggccgctaagaaagcccgtgaaatggttcaacgtaaa
tctccaatgggaggttccggactgccagggaaattatccgactgttcttctaaagatcca
gcagaatctgaactattccttgtggagggagactccgcaggtggtactgcaaaacaaggt
agagatcgtttgttccaggctattttgccactaagaggtaaaatcctgaacgtagagaaa
tctatgttgcacaaggtatatgataatgacgagattaagaatatctatacggctttaggg
gtaagtgttggtactgaagaagacagcaaggcacttaaccttacaaaacttagatatcat
aagatcgttattatgaccgatgccgatgtagatggttctcacatttccacattgattctt
acattcttcttcagatatatgaaggagcttattgaaaacggttatgtatatatcgcttct
ccgccattatatttggtgaagaaaggtaacaagaaagtatatgcatggaacgagaaagag
cgtgaagaacttactcaggaattatccaaagatggtaaaggagtagagattcagcgttac
aaaggtcttggggaaatgaatcctgaacagctttgggatacaactctgaatcctgagcac
cgtacactaaagcaggttactattgataatgctgtagaggctgataatgtattctccatg
ctaatgggtgacgaggttccgccacgtagagattttatcgagaaaaatgctgtttatgct
aaaatcgatgcttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

Download RDF

DBGET integrated database retrieval system