KEGG   Escherichia coli clone D i14: i14_4867
Entry
i14_4867          CDS       T02003                                 
Symbol
yjgR
Name
(GenBank) hypothetical protein
  KO
K06915  DNA double-strand break repair helicase HerA and related ATPase
Organism
elc  Escherichia coli clone D i14
Brite
KEGG Orthology (KO) [BR:elc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:elc03400]
    i14_4867 (yjgR)
DNA repair and recombination proteins [BR:elc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Archaeal homologous recombinant proteins
     i14_4867 (yjgR)
SSDB
Motif
Pfam: HerA_C DUF87 AAA_22 TrwB_AAD_bind AAA_10 ResIII AAA_16 FtsK_SpoIIIE SLFN-g3_helicase AAA_30 AAA Zot AAA_25 AAA_7 AAA_19 CbiA T2SSE AAA_18 Hydrolase SRP54 AAA_28 NTPase_1 nSTAND3 AAA_6 P-loop_TraG
Other DBs
NCBI-ProteinID: AER92295
Position
complement(4877151..4878653)
AA seq 500 aa
MSKPLLIARTLDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVK
GDLTGVAAEGTASEKLLARLKNIGVNDWQPHTNPVVVWDIFGEKGHPVRATVSDLGPLLL
ARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASV
GAIQRGLLSLEQQGAAHLFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLL
WMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFV
SQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRPNPTFDTEKAIQELGTGE
ALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLVNHSPVYGKYEDDVDRESAYEM
LQKGFQASIEQQNNPPAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAAR
QVTNQIVRGMLGSLLGGRRR
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgagcaaacccctgttaattgcccgcacgctggacacagaactgtttttactgccggga
atggctaaccgtcacgggctgattactggcgcaacggggacaggtaaaactgtcacgctg
caaaaactggcggaatctctgtcagaaatcggcgttccggtgtttatggccgatgtaaaa
ggtgatttaaccggggttgcggcagaaggtacggcgtcggaaaaactgctcgcaaggctt
aaaaatatcggcgtaaatgactggcaacctcatactaatccggtggtggtgtgggatatc
tttggcgagaaaggccacccggtgcgggcgacggtttcggatctggggccgctgttgctg
gcgcggctgttgaatctcaacgatgtgcaatctggcgtgctgaatatcattttccgcatt
gctgacgatcagggattgttgctgctcgactttaaagatctgcgggcaattacccagtac
atcggcgataacgccaaatccttccagaatcagtacggtaatatcagtagtgcatcggtt
ggtgccatccagcgcgggctgttgtcgctggaacagcaaggcgcagcacacttatttggt
gagccgatgctggatatcaaagactggatgcgcaccgatgccaacggtaaaggcgttatc
aatatccttagcgccgaaaaactctaccagatgccgaaactgtacgccgccagcctgttg
tggatgctttcagagttgtatgaacaattgccggaagcgggcgatctggagaaaccaaaa
ctggtgtttttcttcgacgaagcgcatctgctgtttaacgatgcaccgcaggtactgctg
gataagattgagcaggtgataaggcttattcgctcaaaaggcgtgggcgtctggttcgtt
tcgcaaaacccgtcagatatcccggataacgtgctcgggcagctcggtaatcgcgttcaa
cacgctttgcgtgcttttacgcctaaagatcagaaagcagtgaaggcagcggcgcaaacc
atgcgccccaatccgacgtttgataccgaaaaggcaatccaggaactggggacgggcgaa
gcgttaatctcgtttctcgatgcgaaaggaagcccttcagtggtggaacgggcgatggtg
attgccccctgttcacgaatggggccggtgacggaagatgagcgcaatggcttggttaac
cactccccggtgtatggcaagtacgaggatgacgtggaccgagaatccgcctatgagatg
ttgcaaaaaggctttcaggccagtatcgagcagcaaaataatcctcccgcgaaagggaaa
gaggtggcggtggatgacggtattctcggtggattgaaggatattttgttcggcactacc
ggaccacgcggcgggaagaaagatggtgtggtgcaaacaatggcaaaaagcgccgcccgc
caggtgacgaatcagattgtgcgcgggatgttggggagtttgctgggggggagaagaagg
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (25)   
   Pfam (25)   
All databases (31)   

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