KEGG   Escherichia coli LF82: LF82_2101
Entry
LF82_2101         CDS       T00854                                 
Symbol
sdiA
Name
(GenBank) Regulatory protein sdiA
  KO
K07782  LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
elf  Escherichia coli LF82
Pathway
elf02020  Two-component system
elf02024  Quorum sensing
elf02026  Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:elf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LF82_2101 (sdiA)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LF82_2101 (sdiA)
   02026 Biofilm formation - Escherichia coli
    LF82_2101 (sdiA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:elf03000]
    LF82_2101 (sdiA)
Transcription factors [BR:elf03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    LF82_2101 (sdiA)
SSDB
Motif
Pfam: Autoind_bind GerE Sigma70_r4_2 HTH_20 Sigma70_r4 HTH_10 HTH_23
Other DBs
NCBI-ProteinID: CAP76398
Position
complement(1957766..1958488)
AA seq 240 aa
MQDTDFFSWLRTMLLRFQRMEAAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY
TNYPESWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVT
QYLMLPNRALGFLSFSRCSTREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF
SKREKEILKWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI
NT seq 723 nt   +upstreamnt  +downstreamnt
atgcaggatacggattttttcagctggcttcgcacgatgttgttgcgttttcagaggatg
gaggccgcagaagaggtctaccatgaaatagagcttcaggctcagcagctggagtacgat
tactattcgttatgtgttcgccacccggtaccattcacgcgacctaaagtggctttctac
accaattaccctgagtcgtgggttagttattatcaggcaaaaaattttctcgcaattgat
ccggtgctgaaccctgaaaactttagtcagggccatttaatgtggaatgatgacttattc
agcgaagcacagccgttatgggaagctgcgcgcgcacatggtttacgccgcggtgtcact
cagtatttaatgttgccaaatcgggcgttgggctttttgtccttttcccgttgcagcacg
cgcgaaatacccattcttagtgatgaactgcaattaaaaatgcagctactggtgcgcgaa
agtctgatggctctgatgcgtttaaatgatgaaatagtgatgacgccagagatgaatttc
agcaagcgcgaaaaagaaattctgaaatggacggcggaaggtaagacatcagcagagata
gcgatgattttgtcaatctctgagaatacggtcaatttccatcagaaaaacatgcagaaa
aaaatcaatgcaccgaataagacgcaggttgcctgttacgcggccgctactggcttaatt
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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