KEGG   Escherichia coli O83 H1 NRG 857C (AIEC): NRG857_16475
Entry
NRG857_16475      CDS       T02068                                 
Name
(GenBank) general secretion pathway protein D precursor
  KO
K02453  general secretion pathway protein D
Organism
eln  Escherichia coli O83:H1 NRG 857C (AIEC)
Pathway
eln03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:eln00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NRG857_16475
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:eln02044]
    NRG857_16475
Secretion system [BR:eln02044]
 Type II secretion system
  General secretion pathway protein
   NRG857_16475
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 Pro_Al_protease Lactamase_B_6
Other DBs
NCBI-ProteinID: ADR28703
UniProt: A0A0H3EMG7
Position
3473703..3475667
AA seq 654 aa
MDSAMKGLNKITCCLLAALLMPCAGHAENEQYGANFNNADIRQFVEIVGQHLGKTILIDP
SVQGTISVRSNDTFSQQEYYQFFLSILDLYGYSVITLDNGFLKVVRSANVKTSPGMIADS
SRPGVGDELVTRIVPLENVPARDLAPLLRQMMDAGSVGNVVHYEPSNVLILTGRASTINK
LIEVIKRVDVIGTEKQQIIHLEYASAEDLAEILNQLISESHGKSQMPALLSAKIVADKRT
NSLIISGPEKARQRITSLLKSLDVEESEEGNTRVYYLKYAKATNLVEVLTGVSEKLKDEK
GNSRKPSSTSAMDNVAITADEQTNSLVITADQSVQEKLATVIARLDIRRAQVLVEAIIVE
VQDGNGLNLGVQWANKNVGAQQFTNTGLPVFNAAQGVADYKKNGGITSANPAWDMFSAYN
GMAAGFFNGDWGVLLTALASNNKNDILATPSIVTLDNKLASFNVGQDVPVLSGSQTTSGD
NVFNTVERKTVGTKLKVTPQVNEGDAVLLEIEQEVSSVDSSSNSTLGPTFNTRTIQNAVL
VKTGETVVLGGLLDDFSKEQVSKVPLLGDIPLVGQLFRYTSTERAKRNLMVFIRPTIIRD
DDVYRSLSKEKYTRYRQEQQLRIDGKSKALVGSEDLPVLNENTFNSHAPAPSSR
NT seq 1965 nt   +upstreamnt  +downstreamnt
atggacagcgcaatgaagggactcaataaaatcacctgctgcttgctggcagcactactc
atgccttgtgcaggacacgctgagaacgaacaatacggcgctaacttcaataacgccgat
atccgccagttcgtggaaatagtgggtcagcatcttggcaaaacgatcctgatcgaccct
tcggtacagggaaccatttccgtacgcagtaatgatacgtttagccaacaggagtactac
cagttctttttaagtattcttgatctttacggttattccgtgatcacactggacaatggt
tttctgaaagtggtgcgctcagctaatgtaaaaacatcgccagggatgattgctgacagt
tctcgtccaggcgtaggtgatgagttggtcacccgaatcgtaccgcttgagaacgttcct
gctcgtgacctggctcccctgctccgccagatgatggatgcgggtagcgtcggtaatgtt
gtgcattatgaaccctccaacgttcttattctgaccggtcgtgcctccaccattaataaa
ctgattgaagtcataaagcgcgttgatgtcatcggcacagagaagcagcaaattattcat
ctggaatatgcatcagcggaagatctcgccgagattcttaatcaattaatcagcgaaagc
cacggtaaaagccagatgcctgccctcctttccgcgaagattgtggcggataagcgaacc
aactctcttatcatcagcgggccggaaaaagcacgccagcgcataacttcattactgaaa
agccttgatgtagaagagagcgaggaaggaaatacccgggtctattacctgaaatatgct
aaagccacgaatctggtggaagtgctaaccggtgtttccgaaaagctgaaagatgaaaaa
gggaattcgcgtaagccttcttctacttctgcgatggataatgtggccattaccgccgat
gaacagaccaactcgttggtcattaccgctgaccagtccgtccaggagaaactcgccacg
gtaattgcgcgtctggatattcgccgtgcacaggtgctggttgaggcaatcatcgtcgaa
gttcaggatggaaatggactcaacctcggcgtgcaatgggcgaataaaaacgttggcgca
cagcaatttaccaatacgggattaccggtttttaacgctgcgcaaggtgtagctgattat
aaaaagaatggcgggatcaccagcgcgaatcctgcctgggatatgtttagcgcctacaat
ggcatggctgcaggcttcttcaatggcgactggggcgtattgttgactgcgctggccagt
aacaataaaaatgacatcctcgccaccccgagcatcgtaacgctggataataaactcgcg
tccttcaacgttggtcaggatgtgccggtgctatccggctctcagaccacttctggggat
aacgtctttaatactgtcgaacgcaaaacggtgggcacaaaactcaaagtcactccgcag
gtcaatgaaggcgacgcggtactgctcgaaatagagcaggaggtttccagcgttgactct
tcgtctaattcgacgctcggcccgacatttaacacccgtactattcaaaacgccgtgctg
gttaaaaccggtgaaacggtggtcctgggcggattgctggatgatttttctaaagagcaa
gtgtcaaaggttcctctgcttggcgatattcctttagtgggacaactcttccgctatacc
tcgaccgagcgcgctaaacgcaacctgatggtatttatccgcccgacgattatccgtgac
gatgatgtttatcgctcactgtcaaaagagaaatacacccgctaccgtcaggagcaacag
ctgcgaatcgacgggaaatcaaaagcgctggttggctcggaagatttgccggtgctgaat
gagaacacgttcaacagtcacgcccctgcgccatcgtcacggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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