KEGG   Escherichia coli O44 H18 042 (EAEC): EC042_3251
Entry
EC042_3251        CDS       T02067                                 
Symbol
gspD
Name
(GenBank) type II secretion system protein D
  KO
K02453  general secretion pathway protein D
Organism
elo  Escherichia coli O44:H18 042 (EAEC)
Pathway
elo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:elo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    EC042_3251 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:elo02044]
    EC042_3251 (gspD)
Secretion system [BR:elo02044]
 Type II secretion system
  General secretion pathway protein
   EC042_3251 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 LUD_dom
Other DBs
NCBI-ProteinID: CBG36080
UniProt: D3GVM0
Position
complement(3467049..3469109)
AA seq 686 aa
MFWRDITLSVWRKKTTGLKTKKRLLPLVLAAALCSSPVWAEEATFTANFKDTDLKSFIET
VGANLNKTIIMGPGVQGKVSIRTMTPLNERQYYQLFLNLLEAQGYAVVPMENDVLKVVKS
SAAKVEPLPLVGEGSDNYAGDEMVTKVVPVRNVSVRELAPILRQMIDSAGSGNVVNYDPS
NVIMLTGRASVVERLTEVIQRVDHAGNRTEEVIPLDNASASEIARVLESLTKNSGENQPA
TLKSQIVADERTNSVIVSGDPATRDKMRRLIRRLDSEMERSGNSQVFYLKYSKAEDLVDV
LKQVSGTLTAAKEEAEGTVGSGREVVSIAASKHSNALIVTAPQDIMQSLQSVIEQLDIRR
AQVHVEALIVEVAEGSNINFGVQWASKDAGLMQFANGTQIPIGTLGAAISQAKPQKGSTV
ISENGATTINPDTNGDLSTLAQLLSGFSGTAVGVVKGDWMALVQAVKNDSSSNVLSTPSI
TTLDNQEAFFMVGQDVPVLTGSTVGSNNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVI
EQEVSKVEGQTSLDVVFGERKLKTTVLANDGELIVLGGLMDDQAGESVAKVPLLGDIPLI
GNLFKSTADKKEKRNLMVFIRPTILRDGMAADGVSQRKYNYMRAEQIYRDEQGLSLMPHT
AQPVLPAQNQALPPEVRAFLNAGRTR
NT seq 2061 nt   +upstreamnt  +downstreamnt
gtgttttggcgtgatattacgttgtcggtctggcgtaagaagacaactggcctcaaaaca
aaaaagcgtttactgccgctggtgctggcagcggcattatgcagttcaccggtctgggcg
gaagaagccactttcaccgctaattttaaagataccgacctgaaatcgttcatcgaaacc
gtcggcgctaaccttaataaaaccatcattatggggccgggcgtacaggggaaagtgagt
attcgtaccatgactccgctcaatgaacgccagtattaccagctattccttaacctgctg
gaagcacaggggtatgccgtcgtaccgatggaaaacgacgtgctgaaggtggtgaaatcc
agcgccgcgaaagtcgagccactgccgttggtcggtgaaggcagcgacaactacgcgggc
gatgaaatggtcaccaaagtagtgccggtacgtaatgtgtcggtccgcgaactggcaccg
attttgcgccagatgatcgacagcgcaggctcaggcaacgttgttaattacgatccctcc
aacgtaattatgctcaccggacgcgcctccgtcgtggagcggctgacagaagtgatccag
cgcgtggatcacgcgggtaatcgcactgaagaggtgatcccgctggataacgcctcggct
tcggaaatcgcccgcgtgctggaaagcctgacgaaaaacagcggcgagaaccagcctgcg
acgctgaaatcacagattgtcgccgacgaacgcaccaacagtgtgattgtcagtggtgac
ccggccacgcgggacaaaatgcgccgcctgatccgtcggctggactcagaaatggagcgc
agcggcaacagccaggttttctatctcaaatacagcaaagcggaagatctggtcgatgtg
ctgaagcaggtcagcggcacgctcacggcggctaaagaagaggcggaaggcaccgtcggt
agcgggcgtgaggttgtctccatcgccgccagcaaacacagtaatgccctgattgttacc
gcgccgcaggacatcatgcagtcgctgcaaagcgtgattgaacaactggatattcgccgt
gctcaggtgcatgtcgaggcgttgatcgtggaagttgctgaaggcagcaatatcaacttc
ggcgtgcagtgggcgtcgaaagatgccggattaatgcagtttgctaacggtacgcagatc
cctatcggtacgctgggcgcagcgatttctcaggcgaaaccgcagaaaggctcgacggtg
atcagtgaaaacggcgctaccaccattaatccggataccaacggcgatctctccacgctc
gcccagcttctttccggcttcagtggtacggcggttggcgtggtgaaaggcgactggatg
gcactggtacaggcggtcaaaaacgactccagctcgaacgtgctctccacgccgagcatc
accacgctggacaaccaggaagccttcttcatggtgggccaggacgttccggtattaact
ggatctaccgttggctccaataacagcaatcctttcaacaccgtagagaggaaaaaagtc
ggcatcatgctgaaagttacgccgcagattaacgaaggtaacgcggtacagatggtgatt
gagcaggaagtgtcgaaggtggaaggacagaccagcctcgacgtcgtgtttggtgagcgc
aaactgaagaccaccgtgctggctaacgatggtgaactgatcgtgcttggcggtctgatg
gacgaccaggcgggagaaagcgtggcgaaagtgccgctgctgggcgatatcccgttgatt
ggtaacctgtttaaatcgacggcggataaaaaagaaaaacgtaacctgatggtgtttatc
cgcccgaccattctgcgtgacggtatggcggcagacggcgtgtcgcagcgcaaatataac
tacatgcgcgccgagcagatctatcgcgatgagcaaggcttaagcctgatgccgcacacc
gcgcagccggtactgccagcgcaaaatcaggccttaccgccggaagttcgcgcattcctc
aatgccgggagaacgcgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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