KEGG   Esox lucius (northern pike): 105009664
Entry
105009664         CDS       T04894                                 
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
Organism
els  Esox lucius (northern pike)
Pathway
els03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105009664 (dhx36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:els03019]
    105009664 (dhx36)
Enzymes [BR:els01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     105009664 (dhx36)
Messenger RNA biogenesis [BR:els03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     105009664 (dhx36)
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C DEAD HA2_N AAA_22 nSTAND3 AAA_19 ATPase NB-ARC T2SSE AAA_16 DUF4211
Other DBs
NCBI-GeneID: 105009664
NCBI-ProteinID: XP_012996175
UniProt: A0A3P8XVN2
Position
LG01:36838642..36904142
AA seq 1050 aa
MSFEGYGGRRGGRRGGRGFGRDGSRERWDRGAGSSGSRPPRNSEWESREERGGRGGGPNR
PPSHLKGREIGLWYAKWGGLKRKENERKSRAVVQMDESREQHITNLLNTVQRGPSREARP
STSDNWRSASSVPDRGGHCYFDGDEPSPDVLKTETKQEEVETPVQNSLLTSQRYFPKEAP
KVEPQEERTETEQIGKDKDLEYLFQEVVRENALDQQLKRDLERKRADSKYLEMLKFREKL
PSFGKKEELVEVIRSNQVLVVSGETGCGKTTQVTQFILDDYIDRGMGSLCRVVCTQPRRI
SAISVAERVAAERAERVGDGNSCGYQIRLQSRLPRKQGSVLYCTTGIILQWLRSSPLLST
ISHLVLDEIHERNLHSDVLLIIVKDLLRVRHDLKVILMSATLNAEKFSRYFDNCPMIHIP
GMTFPVQEFLLEDVVEMLRYRPQKQERRPRWKRGFMQAQNSRPEKEQKEAEYKESWPCYA
RTLRDRYSDSTIEVLEMMDDDDKIDLELVVQLIRHIVLSEEEGAILVFLPGWDNISSLND
LLMTQQMFKSDRFVIIPLHSLMPTVTQTSVFKRPPPGVRKIVIATNIAETSITIDDVVFV
IDGGKIKETHFDTQNNISTMAAEWVSLANAKQRRGRAGRVCPGKCYHLYNSLRASLMEAY
QLPEIMRTPLEELCLQIKILKLGPIAEFLRKALDPPTEEAITLAITHLMDLNALERSEAL
TPLGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKVADMRRR
TLSRDSKSDHLTIVNAFCGWEEAKLRSNQVEREFCWSNFLSANTLQMLHNMKGQFAEHLL
GAGFISSKNPKDPEANFNSENEKLIKAVIVAGLYPKVAMIKPSGSKKRPVRVYTKTDGKV
CIHPKSVNAEEIQFNYSWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQTDEETIA
VDEWIVFQSPARIANLVKSLKKELDSLLEEKIRNPAPVDWRDSQSKDCAVITAIIDLITT
QEKPNLNAANTSWRNSAPTGHHRYFNDDER
NT seq 3153 nt   +upstreamnt  +downstreamnt
atgagttttgaaggctatggtggcagaagaggaggccgaagaggaggtcgaggatttgga
agagatggaagccgtgagaggtgggaccgtggagctgggtcaagtggcagtagacccccg
cggaactccgaatgggagtcgcgggaagaacggggagggcgaggtggaggtccaaaccgt
ccaccttcgcatctgaagggccgtgagatcggactgtggtatgcaaaatggggaggcctg
aagaggaaagaaaatgaaagaaaatcgcgtgcagttgttcagatggatgagtccagggag
cagcacatcactaatctgttgaacacagtccagagaggcccgtcaagggaagcccgtccc
tccacatcagacaactggcgttcagcgtcgtcagtgccagacagaggtggccactgttac
tttgatggagatgagccctctccggatgtcctgaagactgaaaccaaacaagaggaggtg
gagacgccggtacagaactctctgctcacctcccaacgttactttcccaaggaggcccct
aaagttgagccccaggaagaaaggacagaaacggagcaaatagggaaggataaagatctg
gagtacttatttcaggaggtggtcagggagaatgcactggaccaacagttaaagagggac
ctggagaggaagagggcagactccaaatacctggaaatgctgaaattcagagaaaaactt
ccctcctttggcaagaaagaggagctggtggaggtgatccggtccaaccaggtgcttgtg
gtcagtggagagacgggctgtggtaaaaccacccaggtgacccagtttatcttggacgac
tacattgacaggggcatgggctcactctgcagggtggtgtgcactcagccacgacgcatc
agtgccatatctgtagcagagagggtggctgcggaaagggcagaaagagtgggggatgga
aactcttgcggctaccagatccgcctgcagagtcggttaccacggaaacagggatcggtg
ctgtattgtacaacgggcattatactacagtggcttcgttcctcccctctgctgtcaacc
atcagccacttggttttagatgagatccatgagaggaacttgcactctgacgtcctgctc
atcattgtcaaggacctgctccgagtccgacacgacctcaaggtcatcctcatgagtgcc
actctaaatgctgagaagttctccagatactttgataactgtcctatgatccacatcccg
gggatgaccttccctgtgcaggagtttctattggaggatgtggtggagatgctcaggtac
cgtccccagaagcaagaacggagacccaggtggaagaggggtttcatgcaggctcaaaat
tcccgaccagagaaagagcagaaagaggcagagtacaaagagagctggccctgttacgcc
cgcacactccgagataggtactctgacagcaccattgaagtgttggagatgatggacgac
gacgataagattgacctggaactcgtagtccagctcatcaggcacatcgtactcagcgag
gaagaaggagcaatcctggtgtttctgccaggttgggacaacatcagcagcctcaacgac
ctcctcatgacccaacagatgtttaaatccgataggtttgtgatcattcctctacactcc
ctgatgcccactgtcacccagacatcggtgtttaaaaggccccctccaggagtccggaag
attgtcattgcaaccaatattgctgagaccagtattaccatcgatgatgtggtttttgtc
attgatggaggaaagattaaggagactcactttgacactcaaaacaacatcagcaccatg
gccgcagagtgggtcagcctggccaatgccaagcaaaggagaggacgagctggcagagtg
tgtccagggaagtgttatcacctgtataacagtctgagggcaagtctgatggaggcctac
cagctaccagagatcatgcgcacacctctggaggagctctgtctgcagatcaagatcctc
aagcttggacccatagccgagttcctgaggaaagctctggatcctcccacagaggaagcc
ataactctggccatcacgcacttaatggacctcaacgcactggagcgctctgaggctctg
acaccgttaggcttccacctggccaggctgcctgtggagcctcacatcgggaagctgatt
ctgtttggagctctgctgggctgtctggaccctgtcctcaccattgctgcctcgctcagc
ttcaaagaccctttcttcatacctctgggtaaggagaaggttgcagacatgaggagacga
actctgtccagggactcaaagagtgaccaccttaccattgtcaacgctttttgcggctgg
gaggaggcgaagctccgcagcaaccaggtcgagcgagagttctgttggagcaacttcctg
tccgccaacacactccagatgctgcacaacatgaaaggtcagttcgctgagcacctgctg
ggggctggcttcatcagcagcaaaaacccaaaagatccggaggcgaatttcaactcagag
aacgagaagctgatcaaggcagtcatagtggcaggactctaccccaaagtggccatgatt
aaacccagcggaagtaagaaaagaccggtgagagtgtacacaaagacagatggcaaggtg
tgtatccaccctaagtcagtgaatgctgaggagatccagttcaactactcctggctcatc
taccaccttaagatgaggaccagcagtatcttcctgtatgactgcaccgaggtgtctccg
ttctccctgctgttcttcggcggcgacatcaccattcagacggacgaggagaccatcgct
gtggacgagtggatcgtcttccagtccccagcgcgcattgcaaaccttgtcaagagtctg
aagaaggagctcgactcgctattggaagagaagatccgtaatcccgctcctgttgactgg
agagacagccaatccaaagactgcgctgtcatcactgccatcatagacctgatcaccacc
caggagaaacccaaccttaatgcagccaacactagttggaggaactctgcccccactgga
catcataggtatttcaacgacgacgagcgctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (56)   

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