KEGG   Enterobacter sp. R4-368: H650_16070
Entry
H650_16070        CDS       T02700                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
enr  Enterobacter sp. R4-368
Pathway
enr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:enr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H650_16070 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:enr03021]
    H650_16070 (rho)
   03019 Messenger RNA biogenesis [BR:enr03019]
    H650_16070 (rho)
Transcription machinery [BR:enr03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     H650_16070 (rho)
Messenger RNA biogenesis [BR:enr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     H650_16070 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB AAA_22 AAA_25 AAA FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: AGN86581
Position
3183535..3184794
AA seq 419 aa
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
FDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaatcttaccgaattaaagaatacgccggtttctgagctgatcactctcggcgaaaat
atggggctggaaaacctggcccgtatgcgcaaacaggacatcattttcgccatcctgaag
cagcacgcgaagagtggcgaagatatctttggcgatggcgtgctggagattctgcaggat
ggatttggtttcctccgctccgcagacagctcctacctcgccggccctgacgacatctac
gtatcccccagccaaatccgccgtttcaacctccgcactggtgacaccatttcaggtaag
attcgcccgcctaaagaaggtgaacgttactttgcattgctgaaagttaacgaggtgaac
ttcgataagccggaaaacgcgcgcaataagattctgttcgaaaacttaacgccgctgcac
gcgaactctcgtctgcgtatggaacgtggtaatggctcgacggaagacttaaccgcacgc
gtactggatctggcgtcgccgatcggtcgtggtcagcgtggtctgattgttgcaccgcca
aaagccggtaaaaccatgctgctgcagaacatcgcgcagagcattgcttacaaccatcca
gactgtgtgctgatggtgctgttgattgacgaacgcccggaagaagtgaccgaaatgcaa
cgtctggttaaaggtgaagtggttgcttccacctttgacgaaccggcttcccgccacgtg
caggttgcagaaatggttatcgagaaggccaagcgcctggtcgagcacaagaaagacgtt
atcattctgctggactccatcactcgcctggcacgtgcttacaacaccgttgttccggct
tccggcaaggtgttgaccggtggtgtcgacgcgaacgccctgcatcgcccgaaacgcttc
ttcggtgccgcgcgtaacgtggaagagggcggcagcctgaccattattgcgaccgcgctg
attgataccggttcgaaaatggacgaagtgatttacgaagagtttaaaggcaccggtaac
atggaactgcacctctcgcgtaaaattgctgaaaaacgtgtcttcccggcgattgattac
aaccgttccggtacgcgtaaagaagagctgctcactactcaggaagagctgcagaaaatg
tggatcctgcgcaaaatcattcacccgatgggtgagatcgacgcgatggagttcctcatt
aacaagctggcaatgacgaagacgaatgatgagttcttcgacatgatgaagcgctcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system